Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_I18
         (399 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1HMM2 Cluster: Single-stranded-DNA-specific exonucleas...    31   6.3  
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    31   6.3  
UniRef50_Q6YV27 Cluster: Putative uncharacterized protein OSJNBb...    31   8.3  

>UniRef50_A1HMM2 Cluster: Single-stranded-DNA-specific exonuclease
           RecJ; n=1; Thermosinus carboxydivorans Nor1|Rep:
           Single-stranded-DNA-specific exonuclease RecJ -
           Thermosinus carboxydivorans Nor1
          Length = 570

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 58  CPYPQKVVYSLALPLSLLKSMGDDSHSPSSELYARL 165
           CPYP+K +  + +   L +++  D+  P  ELY  L
Sbjct: 189 CPYPEKALAGVGVAFKLCQALWQDAGRPVDELYKYL 224


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +1

Query: 118 MGDDSHSPSSELYARLPTR 174
           MGD +HSPS   YA LPTR
Sbjct: 1   MGDGNHSPSGRPYASLPTR 19


>UniRef50_Q6YV27 Cluster: Putative uncharacterized protein
           OSJNBb0060O16.22; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBb0060O16.22 - Oryza sativa subsp. japonica (Rice)
          Length = 198

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -3

Query: 121 PWTSAMTEVEPSCRLPFGDMDISPVIKLFK*LAEADHR 8
           P+  ++  V P CR P+G++D+  V+ +    A A HR
Sbjct: 69  PFAVSLAVVLPCCRFPWGELDLEAVVDVVDHGAGARHR 106


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,180,631
Number of Sequences: 1657284
Number of extensions: 5284880
Number of successful extensions: 10866
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10865
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)