Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_I18
         (399 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   0.77 
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    22   7.2  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    22   7.2  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        22   7.2  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           22   9.5  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    22   9.5  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.4 bits (53), Expect = 0.77
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 157 HTAHLMGSDYRRPWTSAMTEVEPSCRLPF 71
           H  +    DY  P   A T + P+C+ PF
Sbjct: 401 HMNYYHNPDYVAPTPKAKTHICPTCKRPF 429


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 136 SPSSELYARLPTREIKKEST 195
           +P+ EL ARL +RE+++  +
Sbjct: 293 NPAKELIARLKSRELEEHES 312


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 136 SPSSELYARLPTREIKKEST 195
           +P+ EL ARL +RE+++  +
Sbjct: 293 NPAKELIARLKSRELEEHES 312


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 119 WATIVTPHQVSCMLVCLQEK*KKSPQRGGS 208
           W  +V+P +    ++C QE+  +   R GS
Sbjct: 87  WKKVVSPAEKETEVLCQQEREFREYLRNGS 116


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 92  LYLCHC*SPWATIVTPHQVSCMLVCLQE 175
           L L HC  P    +T H+ + M + L+E
Sbjct: 153 LQLTHCYDPDGVRMTDHESATMEIRLKE 180


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 245 TYLYPLNSS*GSMIRPFVDSFFISLVGR 162
           T + PLN   G  I P V  F   LVG+
Sbjct: 571 TTMIPLNKISGRKIDPSVARFAEELVGK 598


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 289,582
Number of Sequences: 2352
Number of extensions: 5297
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)