Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_I12
         (865 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    25   3.9  
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    24   6.9  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +3

Query: 420 KYKTCSIYIYRYLLITINFSFQNLFKSQKSASICSNFSYINIL*NTFYLCAET 578
           KY  C    Y  +   I    + LF +      C   SY+++L   FYL A++
Sbjct: 230 KYYPCCAEPYPDIFFNITLRRKTLFYTVNLIIPCVGISYLSVL--VFYLPADS 280


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 322 DYSKLRGDTGPLVYPAGFVYIYSFLYLITNQGENIK 429
           DY +LR    PL YP   V++  F  +  +  EN+K
Sbjct: 6   DYDRLR----PLSYPQTDVFLVCFSVVSPSSFENVK 37


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,444
Number of Sequences: 2352
Number of extensions: 17237
Number of successful extensions: 62
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)