Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_I12
         (865 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09022-1|CAA70220.1|  438|Homo sapiens Not56-like protein protein.    233   5e-61
BC004313-1|AAH04313.1|  433|Homo sapiens ALG3 protein protein.        233   5e-61
BC002839-1|AAH02839.1|  438|Homo sapiens asparagine-linked glyco...   233   5e-61
AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    31   7.2  

>Y09022-1|CAA70220.1|  438|Homo sapiens Not56-like protein protein.
          Length = 438

 Score =  233 bits (571), Expect = 5e-61
 Identities = 109/206 (52%), Positives = 143/206 (69%)
 Frame = +1

Query: 238 IVEKVPYTEIDWKAYMQECEGFLNGTTLDYSKLRGDTGPLVYPAGFVYIYSFLYLITNQG 417
           ++ +V YTEIDWKAYM E EG +NGT  DY++L+GDTGPLVYPAGFVYI+  LY  T++G
Sbjct: 60  VIHRVAYTEIDWKAYMAEVEGVINGT-YDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRG 118

Query: 418 ENIKLAQYIFIGIYLLQLTLVFRIYLKAKKVPPYVLILVILTSYRIHSIYVLRLFNDPIA 597
            +I++AQ IF  +YL  L LVF IY +  KVPP+V   +   SYR+HSI+VLRLFNDP+A
Sbjct: 119 TDIRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVA 178

Query: 598 VLLLYVSLNFFLESKWFLGSLFYSLGVSVKMNILLYAPAXXXXXXVNLGLKLTLVQLLIC 777
           ++LL++S+N  L  +W  G  F+SL VSVKMN+LL+AP          G +  L +L IC
Sbjct: 179 MVLLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGIC 238

Query: 778 GSVQVXLGLPFLISNPVSYIKGXLTL 855
             +QV LGLPFL+ NP  Y+     L
Sbjct: 239 AGLQVVLGLPFLLENPSGYLSRSFDL 264


>BC004313-1|AAH04313.1|  433|Homo sapiens ALG3 protein protein.
          Length = 433

 Score =  233 bits (571), Expect = 5e-61
 Identities = 109/206 (52%), Positives = 143/206 (69%)
 Frame = +1

Query: 238 IVEKVPYTEIDWKAYMQECEGFLNGTTLDYSKLRGDTGPLVYPAGFVYIYSFLYLITNQG 417
           ++ +V YTEIDWKAYM E EG +NGT  DY++L+GDTGPLVYPAGFVYI+  LY  T++G
Sbjct: 55  VIHRVAYTEIDWKAYMAEVEGVINGT-YDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRG 113

Query: 418 ENIKLAQYIFIGIYLLQLTLVFRIYLKAKKVPPYVLILVILTSYRIHSIYVLRLFNDPIA 597
            +I++AQ IF  +YL  L LVF IY +  KVPP+V   +   SYR+HSI+VLRLFNDP+A
Sbjct: 114 TDIRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVA 173

Query: 598 VLLLYVSLNFFLESKWFLGSLFYSLGVSVKMNILLYAPAXXXXXXVNLGLKLTLVQLLIC 777
           ++LL++S+N  L  +W  G  F+SL VSVKMN+LL+AP          G +  L +L IC
Sbjct: 174 MVLLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGIC 233

Query: 778 GSVQVXLGLPFLISNPVSYIKGXLTL 855
             +QV LGLPFL+ NP  Y+     L
Sbjct: 234 AGLQVVLGLPFLLENPSGYLSRSFDL 259


>BC002839-1|AAH02839.1|  438|Homo sapiens asparagine-linked
           glycosylation 3 homolog (S. cerevisiae,
           alpha-1,3-mannosyltra protein.
          Length = 438

 Score =  233 bits (571), Expect = 5e-61
 Identities = 109/206 (52%), Positives = 143/206 (69%)
 Frame = +1

Query: 238 IVEKVPYTEIDWKAYMQECEGFLNGTTLDYSKLRGDTGPLVYPAGFVYIYSFLYLITNQG 417
           ++ +V YTEIDWKAYM E EG +NGT  DY++L+GDTGPLVYPAGFVYI+  LY  T++G
Sbjct: 60  VIHRVAYTEIDWKAYMAEVEGVINGT-YDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRG 118

Query: 418 ENIKLAQYIFIGIYLLQLTLVFRIYLKAKKVPPYVLILVILTSYRIHSIYVLRLFNDPIA 597
            +I++AQ IF  +YL  L LVF IY +  KVPP+V   +   SYR+HSI+VLRLFNDP+A
Sbjct: 119 TDIRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVA 178

Query: 598 VLLLYVSLNFFLESKWFLGSLFYSLGVSVKMNILLYAPAXXXXXXVNLGLKLTLVQLLIC 777
           ++LL++S+N  L  +W  G  F+SL VSVKMN+LL+AP          G +  L +L IC
Sbjct: 179 MVLLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGIC 238

Query: 778 GSVQVXLGLPFLISNPVSYIKGXLTL 855
             +QV LGLPFL+ NP  Y+     L
Sbjct: 239 AGLQVVLGLPFLLENPSGYLSRSFDL 264


>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
 Frame = +1

Query: 373 FVYIYSFLYLITNQGENIKLAQYIFIGIYLLQLTLVFR-IYLKAKKVPPYVLILVILTSY 549
           +VYIY F+Y+       I +  Y+++ IYL     +F  IYL       Y+ I + +  Y
Sbjct: 6   YVYIYMFMYIFIFIYIFIYIYIYVYVYIYLYIYFYIFTYIYL-------YIFIYIYICLY 58

Query: 550 RIHSIYVLRLFNDPIAVLLLYVSLNFFL 633
               IY L +F      L +++ L+ F+
Sbjct: 59  IYLYIY-LYIFTYIYIYLHIFIYLHIFI 85


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,734,486
Number of Sequences: 237096
Number of extensions: 2088295
Number of successful extensions: 2872
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2868
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)