Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_I12
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83234-5|CAB70171.2|  640|Caenorhabditis elegans Hypothetical pr...   227   8e-60
Z48795-5|CAA88729.1|  337|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z81117-14|CAB03313.3|  272|Caenorhabditis elegans Hypothetical p...    31   1.4  
Z79600-10|CAB01874.2|  208|Caenorhabditis elegans Hypothetical p...    29   3.2  
U46671-4|AAA85749.1|  429|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U21308-17|AAB93317.1|  141|Caenorhabditis elegans Hypothetical p...    28   9.9  

>Z83234-5|CAB70171.2|  640|Caenorhabditis elegans Hypothetical
           protein K09E4.2 protein.
          Length = 640

 Score =  227 bits (555), Expect = 8e-60
 Identities = 101/202 (50%), Positives = 145/202 (71%)
 Frame = +1

Query: 235 LIVEKVPYTEIDWKAYMQECEGFLNGTTLDYSKLRGDTGPLVYPAGFVYIYSFLYLITNQ 414
           L++ KV YTEIDW  YMQ+ E ++N   L+Y+++ GDTGP VYPAG ++++  L+  T+ 
Sbjct: 37  LVILKVNYTEIDWSTYMQQVECYVNKGILNYTQIGGDTGPCVYPAGHLFVFRLLHFFTSS 96

Query: 415 GENIKLAQYIFIGIYLLQLTLVFRIYLKAKKVPPYVLILVILTSYRIHSIYVLRLFNDPI 594
           G NI+ AQ+IF G Y+  L +VFRI  K  ++PP VL+LV +T YRIHSI+VLRLFNDP+
Sbjct: 97  GRNIRAAQHIFQGFYMFNLFMVFRILHKTMRIPPIVLLLVSITGYRIHSIFVLRLFNDPL 156

Query: 595 AVLLLYVSLNFFLESKWFLGSLFYSLGVSVKMNILLYAPAXXXXXXVNLGLKLTLVQLLI 774
           A++L YV+++ FLE KW +G +FYSL VS+KMN+LL+APA      +N     TL  L +
Sbjct: 157 AMMLFYVAMDRFLEQKWLVGCVFYSLAVSIKMNVLLFAPALFFTLLLNNSYMATLGYLTV 216

Query: 775 CGSVQVXLGLPFLISNPVSYIK 840
           CG +Q+ +G PFL+ +  SY++
Sbjct: 217 CGLIQLYVGGPFLLYDWKSYLQ 238


>Z48795-5|CAA88729.1|  337|Caenorhabditis elegans Hypothetical
           protein R05H5.6 protein.
          Length = 337

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
 Frame = +1

Query: 418 ENIKLAQYIFIGIY--LLQLTLVFRIYLKAKKVPPYVLILVI--LTSYRIHSI-YVLRLF 582
           EN+KL   +FIG++  L  + LV+  +L  K   P +   ++   + Y+++ + Y L   
Sbjct: 132 ENVKLHIGVFIGVFAMLCDMALVYFFFLDEKFDQPSISYFMVPDTSGYKMNWLCYSLLAI 191

Query: 583 NDPIAVLLLY-VSLNFFLESKW 645
           N    V   + V +N  L+ KW
Sbjct: 192 NSVNLVFNYFLVKINTILKEKW 213


>Z81117-14|CAB03313.3|  272|Caenorhabditis elegans Hypothetical
           protein T06E6.3 protein.
          Length = 272

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +1

Query: 379 YIYSFLYLITNQGENIKLAQYIFIGIYLLQ---LTLVFRI 489
           ++  F  +  NQ  NIK  +YI +GIYLL    +TL F+I
Sbjct: 74  FLSVFTPIFYNQMFNIKFTKYIVMGIYLLSFGLITLFFQI 113


>Z79600-10|CAB01874.2|  208|Caenorhabditis elegans Hypothetical
           protein F59C6.3 protein.
          Length = 208

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 25/102 (24%), Positives = 45/102 (44%)
 Frame = +1

Query: 397 YLITNQGENIKLAQYIFIGIYLLQLTLVFRIYLKAKKVPPYVLILVILTSYRIHSIYVLR 576
           Y + N  E +     IFIGI+LL  T +F        +      L  + +  + S+ +L+
Sbjct: 40  YQLGNAPECVYSGWNIFIGIFLL-FTTIFLASGSVASIVTQCFGLAYICAGLLTSVLILK 98

Query: 577 LFNDPIAVLLLYVSLNFFLESKWFLGSLFYSLGVSVKMNILL 702
                 A+L ++ ++   + S   LG   YS+  S+ M  L+
Sbjct: 99  STRVIFAILTVFSAITIIMTSLTILG-FVYSIEGSMPMPELM 139


>U46671-4|AAA85749.1|  429|Caenorhabditis elegans Hypothetical
           protein C14E2.4 protein.
          Length = 429

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = +3

Query: 351 PARVPSRLCVYLLFSLFNHKSRRKYKTCSIYIYRYLLITINFSF---QNLFKSQKSASIC 521
           P R   ++   +   +FN   R   +T   + +  LLI  N  F   QN F+        
Sbjct: 262 PIRAGEKIIATIWIRIFNQPIREMQETGGSF-HAGLLIPENHEFSSLQNFFRKCSETFFR 320

Query: 522 SNFSYIN 542
           SNFSY N
Sbjct: 321 SNFSYFN 327


>U21308-17|AAB93317.1|  141|Caenorhabditis elegans Hypothetical
           protein ZK1290.11 protein.
          Length = 141

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 830 ETGLLIKKGKPNXTCTEP 777
           +T L+++K KPN TC +P
Sbjct: 69  DTFLIVEKAKPNVTCADP 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,982,588
Number of Sequences: 27780
Number of extensions: 362996
Number of successful extensions: 871
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)