Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_I07
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   1.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   3.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   4.7  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   4.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   4.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -2

Query: 136 YSLFKLF*IVEFALNIIIICTYIYFEAHI*IFCTTAFLCLNF 11
           Y  F  F I  F ++++  C +I+F  H+ +F     LCL++
Sbjct: 167 YHFFCAFII--FTMHLLFCCAFIFFNMHL-LF----LLCLDY 201



 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 35  CTEYLNMCFKIYISAYYNY 91
           CT Y    F I +  YY Y
Sbjct: 99  CTYYFYYAFIILLCVYYFY 117


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 41  EYLNMCFKIYISAYYNYIQC 100
           EYL    ++Y   YY Y  C
Sbjct: 144 EYLAEAVQLYFQFYYTYFLC 163


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 90  IFNANSTI*KSLNSEYLVQNFGSF 161
           IF   ++  + LNS Y +  FGSF
Sbjct: 242 IFMTTTSFYRILNSGYNLTTFGSF 265


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -1

Query: 338 QKY*SIFHIITVSVGFRVSIHF*SLRHSEFRV 243
           QK+ ++   + +S+G  VSI+  S   +E  +
Sbjct: 32  QKFYAVAFFLALSIGVVVSIYSKSFHRNEIHI 63


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 464 FSYGFTCNFCVRILIQ 417
           + Y  TC FC+ +L +
Sbjct: 497 YLYRMTCLFCINVLAE 512


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -2

Query: 361 SPTDSDVNKNTDPSSIS*LCPLVFAYPFI 275
           SPT   +N NT  SS S   P V A P +
Sbjct: 155 SPTPVSINNNTSTSS-SASSPSVTAAPHL 182


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -1

Query: 467 GFSYGFTCNFC 435
           GF   FTCN C
Sbjct: 494 GFHNPFTCNMC 504


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 147 NFGSFWWKQTCHFRR 191
           NFG+ W K++  F +
Sbjct: 117 NFGAHWMKESISFAK 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,078
Number of Sequences: 336
Number of extensions: 2847
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)