Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_I07
         (500 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0090 - 12347165-12348349                                         94   7e-20
05_01_0264 + 2030080-2031270                                           93   2e-19
01_02_0051 - 10655867-10657057                                         93   2e-19
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279...    31   0.69 
12_02_0655 + 21588662-21589051                                         29   2.8  
06_03_1153 - 28047125-28047751                                         29   2.8  

>01_03_0090 - 12347165-12348349
          Length = 394

 Score = 93.9 bits (223), Expect = 7e-20
 Identities = 42/56 (75%), Positives = 48/56 (85%)
 Frame = +3

Query: 333 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLXCGEITS 500
           FLFTSESV EGHPDK+CDQ+SDA+L A L QDPD+KVACET TKT MV+  GEIT+
Sbjct: 6   FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITT 61


>05_01_0264 + 2030080-2031270
          Length = 396

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 41/56 (73%), Positives = 48/56 (85%)
 Frame = +3

Query: 333 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLXCGEITS 500
           FLFTSESV EGHPDK+CDQ+SDA+L A L +DPD+KVACET TKT MV+  GEIT+
Sbjct: 7   FLFTSESVNEGHPDKLCDQVSDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITT 62


>01_02_0051 - 10655867-10657057
          Length = 396

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 42/62 (67%), Positives = 50/62 (80%)
 Frame = +3

Query: 315 MEDGSVFLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLXCGEI 494
           M +   FLFTSESV EGHPDK+CDQISDA+L A L +DP++KVACET TKT MV+  GEI
Sbjct: 1   MAEVDTFLFTSESVNEGHPDKLCDQISDAVLDACLAEDPESKVACETCTKTNMVMVFGEI 60

Query: 495 TS 500
           T+
Sbjct: 61  TT 62


>03_05_0640 -
           26326832-26327166,26327295-26327529,26327665-26327908,
           26328389-26328507,26328860-26329050,26329133-26329220,
           26331653-26331715,26331816-26333944,26334084-26334186
          Length = 1168

 Score = 30.7 bits (66), Expect = 0.69
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = +3

Query: 318 EDGSVFLFTSESVGEGHPDKM---CDQISDAILXAHLNQDPDAKVACETITKTGMVLXC 485
           +DGS +LFTS+   E HP  M    D+ S+ IL              E I K G  L C
Sbjct: 765 QDGSEWLFTSKRTDESHPFTMHVNFDKFSEDILVGDELVIDGGMATFEVIEKVGNDLRC 823


>12_02_0655 + 21588662-21589051
          Length = 129

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 19/53 (35%), Positives = 23/53 (43%)
 Frame = +2

Query: 281 WIRENQRTQL*YGRWISIFVHIGICWRGSSRQNVRPNKRRYSXRAPESGSGRK 439
           WI   QR ++  G W           RGS    V P +RR S R P SG  R+
Sbjct: 27  WIGGRQRPRMWIGDWREE--------RGSVAVGVAPGRRRESRRRPGSGEARR 71


>06_03_1153 - 28047125-28047751
          Length = 208

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +2

Query: 335 FVHIGICWRG-SSRQNVRPNKRRYSXRAPESGSGRKSCM*NHN*NRYGA 478
           +++   CW+    ++   P    Y  R P +G GR     +H+ + YGA
Sbjct: 106 YIYRSQCWKSLKKKKKPPPPLPLYRPRPPPAGDGRPDVTVHHHHHHYGA 154


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,034,371
Number of Sequences: 37544
Number of extensions: 254910
Number of successful extensions: 498
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)