Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_I07
(500 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 110 6e-25
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 107 4e-24
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 107 4e-24
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 107 4e-24
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 107 4e-24
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 79 2e-15
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 77 7e-15
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 5e-05
Z81510-1|CAB04160.1| 367|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z78198-8|CAB01574.2| 333|Caenorhabditis elegans Hypothetical pr... 27 5.8
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 110 bits (264), Expect = 6e-25
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +3
Query: 327 SVFLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLXCGEITS 500
S FLFTSESV EGHPDKMCDQISDA+L AHL QDP+AKVACET+TKTGMV+ CGEITS
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITS 60
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 107 bits (257), Expect = 4e-24
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +3
Query: 333 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLXCGEITS 500
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVACET+TKTGM++ CGEITS
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITS 61
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 107 bits (257), Expect = 4e-24
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +3
Query: 333 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLXCGEITS 500
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVACET+TKTGM++ CGEITS
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITS 61
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 107 bits (257), Expect = 4e-24
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +3
Query: 333 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLXCGEITS 500
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVACET+TKTGM++ CGEITS
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITS 61
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 107 bits (257), Expect = 4e-24
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +3
Query: 333 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLXCGEITS 500
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVACET+TKTGM++ CGEITS
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITS 61
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 78.6 bits (185), Expect = 2e-15
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +3
Query: 333 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVL 479
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVAC KT VL
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVL 54
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 77.0 bits (181), Expect = 7e-15
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +3
Query: 333 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVAC 449
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 333 FLFTSESVGEGHPDKMCDQ 389
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z81510-1|CAB04160.1| 367|Caenorhabditis elegans Hypothetical
protein F21D9.1 protein.
Length = 367
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 4 LFKNLSTKKPLYRIFKYVLQNIYKCIL 84
+FK T K +Y+ +Y +NIYK ++
Sbjct: 43 IFKLSKTSKKMYKKLRYAKRNIYKLVI 69
>Z78198-8|CAB01574.2| 333|Caenorhabditis elegans Hypothetical
protein F55C5.9 protein.
Length = 333
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 94 NIIIICTYIYFEAHI*IFCTTAFLCLNF 11
NI+ + T I+F AH+ + AF+CL F
Sbjct: 262 NILFVYT-IFFGAHLEVAAYAAFMCLTF 288
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,768,791
Number of Sequences: 27780
Number of extensions: 242321
Number of successful extensions: 531
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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