Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_I05
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    27   0.25 
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    23   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.2  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   9.2  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.2  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 101 IVCYRIVQSSENFLSNEALVSPPVKYFVFK 12
           +V Y + + SENF    A+ + P+KY +F+
Sbjct: 53  LVNYNVSEISENFYYLPAMSTGPLKYAIFQ 82


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 708 SGGSNKAEINLKHANIPAPHSDINSARPIVQPQSFNIPDEPXEI 839
           SG S  ++ N    N   P   I     I+Q   FNIP+ P +I
Sbjct: 31  SGSSAGSDAN----NCKEPVETIMLIYKIIQVSFFNIPNSPQQI 70


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 547  NTIGCGKNPGLST 509
            N  GCGK+P L T
Sbjct: 2670 NRCGCGKHPLLKT 2682


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +3

Query: 372 SPGATTAPTMPQTMNSGEEDKQIPSPMNYFRNVIIPK 482
           SPG  +  ++     +GEED       N  +  I PK
Sbjct: 151 SPGDASNASIGSGEGTGEEDDDTNGKKNQKKRGIFPK 187


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +3

Query: 372 SPGATTAPTMPQTMNSGEEDKQIPSPMNYFRNVIIPK 482
           SPG  +  ++     +GEED       N  +  I PK
Sbjct: 307 SPGDASNASIGSGEGTGEEDDDTNGKKNQKKRGIFPK 343


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,483
Number of Sequences: 336
Number of extensions: 4921
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)