Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_I04
         (593 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164151-1|AAD47075.1|  148|Anopheles gambiae translation initia...   205   1e-54
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            29   0.15 
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           24   4.3  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     24   4.3  
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    23   9.8  

>AF164151-1|AAD47075.1|  148|Anopheles gambiae translation
           initiation factor 4C (1A) protein.
          Length = 148

 Score =  205 bits (500), Expect = 1e-54
 Identities = 94/115 (81%), Positives = 103/115 (89%)
 Frame = +1

Query: 115 NATXKRALVFKAAGQAYAQVTKXLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIIL 294
           N + KR L+FK   Q YAQVTK LGNGRLEAMCFDG+KRLCHIRGKLRKKVWINQGDIIL
Sbjct: 19  NESEKRELIFKEDEQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINQGDIIL 78

Query: 295 IGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINETVVYSVDGLDEDIEFG 459
           IGLRDYQD+KADVILKYTPDEARNLKTYGEFPE+VRINETV +  + +D+DIEFG
Sbjct: 79  IGLRDYQDSKADVILKYTPDEARNLKTYGEFPESVRINETVTFVENDMDDDIEFG 133


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 28.7 bits (61), Expect = 0.15
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +1

Query: 259 KKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFP 390
           K+  ++  + +++ +  Y   K   IL+YT D  R  K Y EFP
Sbjct: 757 KRYLVHAIENLIVVIVIYDKCKDVAILQYTSDRWRQQKYYDEFP 800


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = -2

Query: 115 LRACRAADFCRLDLCFXAXLRXX*RETETSDTTKD 11
           LR CR    C LD C         RE   S   KD
Sbjct: 142 LRKCRNKSTCELDHCVFCFNNKADREVYESHRCKD 176


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = -2

Query: 115 LRACRAADFCRLDLCFXAXLRXX*RETETSDTTKD 11
           LR CR    C LD C         RE   S   KD
Sbjct: 143 LRKCRNKSTCELDHCVFCFNNKADREVYESHRCKD 177


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 310 YQDAKADVILKYTPDEARNLKTYGE 384
           + D   DVI++ TPD  R  + Y E
Sbjct: 93  WADTIEDVIMRSTPDGMRIKQIYSE 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,693
Number of Sequences: 2352
Number of extensions: 9275
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)