Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_I01
         (367 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    26   0.12 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    26   0.12 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   2.6  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 26.2 bits (55), Expect = 0.12
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1

Query: 10  CHSNLLSXSFRSQFKAMQP 66
           CHSNLLS S   Q KA+ P
Sbjct: 78  CHSNLLSTSPSGQNKAVAP 96


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 26.2 bits (55), Expect = 0.12
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1

Query: 10  CHSNLLSXSFRSQFKAMQP 66
           CHSNLLS S   Q KA+ P
Sbjct: 78  CHSNLLSTSPSGQNKAVAP 96


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -2

Query: 300 LFLCFILINISIIRSQNIVCKIDK 229
           + LC+++    ++R  +IVC I +
Sbjct: 702 ILLCYLVTFALVLRPTDIVCGIQR 725


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,139
Number of Sequences: 438
Number of extensions: 850
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)