Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_H23
         (323 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   0.80 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   5.6  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    20   5.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   5.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   5.6  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    20   7.5  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 0.80
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 100 RERDDEKCXMFEDDKDLKRLTRPETVH 20
           R+ DDE   + +DD D +    P + H
Sbjct: 35  RDDDDENITVDDDDTDGRESLSPSSAH 61


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 115 SNEKTRERDDEKCXMFEDDKDLKR 44
           +N+K R+ + E   + +D +DLKR
Sbjct: 287 ANQKLRDLNREVDQIKQDVEDLKR 310


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 101 CLFVASQC 124
           CLFVAS C
Sbjct: 116 CLFVASNC 123


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 198 KRYTAL*LLVVICSCV 245
           K +  L  L+++C CV
Sbjct: 262 KNFVCLLSLIILCDCV 277


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 101 CLFVASQC 124
           CLFVAS C
Sbjct: 116 CLFVASNC 123


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 19.8 bits (39), Expect = 7.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 127 DALRSNEKTRERDDE 83
           DAL S+   RE+D+E
Sbjct: 161 DALVSDSDDREKDEE 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,809
Number of Sequences: 336
Number of extensions: 498
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6155018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)