Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_H23
         (323 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical pr...    28   1.3  
Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical pr...    26   5.4  
AC024201-17|AAO12395.1|   95|Caenorhabditis elegans Hypothetical...    25   9.5  
AC024201-16|AAF36025.1|  192|Caenorhabditis elegans Hypothetical...    25   9.5  
AC024201-15|AAF36024.1|  220|Caenorhabditis elegans Hypothetical...    25   9.5  

>Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical
           protein D1081.3 protein.
          Length = 752

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 112 NEKTRERDDEKCXMFEDDKD 53
           NEK  + DDE C  FEDD++
Sbjct: 714 NEKEDDDDDEDCDDFEDDEE 733


>Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical
           protein F27D4.6 protein.
          Length = 1008

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 7   LPAACARSPALSIASNLCHLQTXNTFHRHV 96
           LP  CA++   +I  N+C+ Q  +T HR+V
Sbjct: 148 LPRFCAQAERPNIC-NVCNNQAPSTIHRYV 176


>AC024201-17|AAO12395.1|   95|Caenorhabditis elegans Hypothetical
           protein Y71F9B.13c protein.
          Length = 95

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 121 LRSNEKTRERDDEKCXMFEDDKDLKRLTRPETVH 20
           L   E  R+RD     M + D+D+K L R  T H
Sbjct: 57  LNYKEYRRDRDQAAEQMAQRDQDIKTLRRHRTRH 90


>AC024201-16|AAF36025.1|  192|Caenorhabditis elegans Hypothetical
           protein Y71F9B.13b protein.
          Length = 192

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 121 LRSNEKTRERDDEKCXMFEDDKDLKRLTRPETVH 20
           L   E  R+RD     M + D+D+K L R  T H
Sbjct: 154 LNYKEYRRDRDQAAEQMAQRDQDIKTLRRHRTRH 187


>AC024201-15|AAF36024.1|  220|Caenorhabditis elegans Hypothetical
           protein Y71F9B.13a protein.
          Length = 220

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 121 LRSNEKTRERDDEKCXMFEDDKDLKRLTRPETVH 20
           L   E  R+RD     M + D+D+K L R  T H
Sbjct: 182 LNYKEYRRDRDQAAEQMAQRDQDIKTLRRHRTRH 215


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,046,064
Number of Sequences: 27780
Number of extensions: 45770
Number of successful extensions: 180
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)