Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_H22
(746 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 307 3e-83
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 307 3e-83
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 307 3e-83
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 307 3e-83
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 307 3e-83
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 307 3e-83
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 305 1e-82
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 3e-41
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 149 1e-35
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 124 3e-28
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 307 bits (754), Expect = 3e-83
Identities = 138/206 (66%), Positives = 163/206 (79%)
Frame = +3
Query: 126 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 305
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 82
Query: 306 LPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAF 485
LP+YGVKVGLTNYAAAY TG EYNVE +D PGAF
Sbjct: 83 LPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAF 142
Query: 486 RCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGL 665
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G
Sbjct: 143 TCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQ 202
Query: 666 HVAEYMXSLEQDDEDSFKRQFXKYIK 743
+VA+YM L ++DED++K+QF +YIK
Sbjct: 203 NVADYMRCLMEEDEDAYKKQFSQYIK 228
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 307 bits (753), Expect = 3e-83
Identities = 138/206 (66%), Positives = 163/206 (79%)
Frame = +3
Query: 126 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 305
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 82
Query: 306 LPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAF 485
LP+YGVKVGLTNYAAAY TG EYNVE +D PGAF
Sbjct: 83 LPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAF 142
Query: 486 RCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGL 665
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G
Sbjct: 143 TCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQ 202
Query: 666 HVAEYMXSLEQDDEDSFKRQFXKYIK 743
+VA+YM L ++DED++K+QF +YIK
Sbjct: 203 NVADYMRYLMEEDEDAYKKQFSQYIK 228
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 307 bits (753), Expect = 3e-83
Identities = 138/206 (66%), Positives = 163/206 (79%)
Frame = +3
Query: 126 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 305
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 82
Query: 306 LPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAF 485
LP+YGVKVGLTNYAAAY TG EYNVE +D PGAF
Sbjct: 83 LPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAF 142
Query: 486 RCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGL 665
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G
Sbjct: 143 TCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQ 202
Query: 666 HVAEYMXSLEQDDEDSFKRQFXKYIK 743
+VA+YM L ++DED++K+QF +YIK
Sbjct: 203 NVADYMRYLMEEDEDAYKKQFSQYIK 228
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 307 bits (753), Expect = 3e-83
Identities = 138/206 (66%), Positives = 163/206 (79%)
Frame = +3
Query: 126 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 305
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 82
Query: 306 LPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAF 485
LP+YGVKVGLTNYAAAY TG EYNVE +D PGAF
Sbjct: 83 LPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAF 142
Query: 486 RCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGL 665
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G
Sbjct: 143 TCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQ 202
Query: 666 HVAEYMXSLEQDDEDSFKRQFXKYIK 743
+VA+YM L ++DED++K+QF +YIK
Sbjct: 203 NVADYMRYLMEEDEDAYKKQFSQYIK 228
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 307 bits (753), Expect = 3e-83
Identities = 138/206 (66%), Positives = 163/206 (79%)
Frame = +3
Query: 126 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 305
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 82
Query: 306 LPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAF 485
LP+YGVKVGLTNYAAAY TG EYNVE +D PGAF
Sbjct: 83 LPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAF 142
Query: 486 RCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGL 665
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G
Sbjct: 143 TCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQ 202
Query: 666 HVAEYMXSLEQDDEDSFKRQFXKYIK 743
+VA+YM L ++DED++K+QF +YIK
Sbjct: 203 NVADYMRYLMEEDEDAYKKQFSQYIK 228
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 307 bits (753), Expect = 3e-83
Identities = 138/206 (66%), Positives = 163/206 (79%)
Frame = +3
Query: 126 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 305
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 30 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 89
Query: 306 LPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAF 485
LP+YGVKVGLTNYAAAY TG EYNVE +D PGAF
Sbjct: 90 LPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAF 149
Query: 486 RCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGL 665
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G
Sbjct: 150 TCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQ 209
Query: 666 HVAEYMXSLEQDDEDSFKRQFXKYIK 743
+VA+YM L ++DED++K+QF +YIK
Sbjct: 210 NVADYMRYLMEEDEDAYKKQFSQYIK 235
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 305 bits (748), Expect = 1e-82
Identities = 137/206 (66%), Positives = 162/206 (78%)
Frame = +3
Query: 126 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 305
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHE 82
Query: 306 LPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAF 485
LP+YGVKVGLTNYAAAY TG EYNVE +D PGAF
Sbjct: 83 LPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAF 142
Query: 486 RCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGL 665
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G
Sbjct: 143 TCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQ 202
Query: 666 HVAEYMXSLEQDDEDSFKRQFXKYIK 743
+VA+YM L ++DED++K+QF +YIK
Sbjct: 203 NVADYMRYLMEEDEDAYKKQFSQYIK 228
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (407), Expect = 3e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +3
Query: 210 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 389
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 390 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 569
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 570 LNVPH 584
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 149 bits (361), Expect = 1e-35
Identities = 64/76 (84%), Positives = 74/76 (97%)
Frame = +3
Query: 126 RREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHE 305
RREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HE
Sbjct: 23 RREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHE 82
Query: 306 LPRYGVKVGLTNYAAA 353
LP+YGVKVGLTNYAAA
Sbjct: 83 LPKYGVKVGLTNYAAA 98
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 124 bits (299), Expect = 3e-28
Identities = 53/76 (69%), Positives = 67/76 (88%)
Frame = +3
Query: 516 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLE 695
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 696 QDDEDSFKRQFXKYIK 743
++DED++K+QF +YIK
Sbjct: 61 EEDEDAYKKQFSQYIK 76
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,740,249
Number of Sequences: 237096
Number of extensions: 2177751
Number of successful extensions: 3815
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3806
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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