Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_H20
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 187 6e-48
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 130 1e-30
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 95 6e-20
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 95 6e-20
AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock pr... 95 6e-20
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 33 0.20
U29381-3|AAA68758.2| 617|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81461-9|CAB62796.1| 597|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF348169-1|AAK37547.1| 597|Caenorhabditis elegans IKB-1 protein. 28 7.4
Z46240-2|CAA86311.1| 213|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 187 bits (456), Expect = 6e-48
Identities = 92/141 (65%), Positives = 113/141 (80%)
Frame = +1
Query: 271 EGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEI 450
E + + + REE++I D LSV+Q+KELR +A+ + FQ EVNRMMKLIINSLYRNKEI
Sbjct: 28 EDAPKETKEETREEDSIKLDGLSVSQIKELRSKAEKHEFQAEVNRMMKLIINSLYRNKEI 87
Query: 451 FLRELISNGSDALDKIRLMSLTDRGVLEANPELSIRIKAEPDKRLLHIIDSGVGMTRADL 630
FLRELISN SDALDKIRL+SLTD L E+S++IKA+ + RLLHI D+GVGMTR DL
Sbjct: 88 FLRELISNASDALDKIRLLSLTDPEQLRETEEMSVKIKADRENRLLHITDTGVGMTRQDL 147
Query: 631 INNLGTIAKSGTADFLSXMQD 693
INNLGTIA+SGT++FLS + D
Sbjct: 148 INNLGTIARSGTSEFLSKLMD 168
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 130 bits (313), Expect = 1e-30
Identities = 60/113 (53%), Positives = 83/113 (73%)
Frame = +1
Query: 358 LRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLEA 537
+ + A+ + FQ E+ ++M LIIN+ Y NKEI+LRELISN SDALDKIR +LT+ L+
Sbjct: 1 MSENAETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDT 60
Query: 538 NPELSIRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFLSXMQDG 696
EL I+I +++ L I+D+G+GMT+ADL+NNLGTIAKSGT F+ +Q G
Sbjct: 61 GKELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 113
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 94.7 bits (225), Expect = 6e-20
Identities = 49/111 (44%), Positives = 67/111 (60%)
Frame = +1
Query: 346 QMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRG 525
Q + + Q + FQ E +M ++ SLY + E+F+RELISN SDAL+K R L +G
Sbjct: 34 QRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL--KG 91
Query: 526 VLEANPELSIRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFL 678
+ P IRI DKR + D+G+GM R DL+ LGTIAKSG+ DF+
Sbjct: 92 DVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFI 141
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 94.7 bits (225), Expect = 6e-20
Identities = 49/111 (44%), Positives = 67/111 (60%)
Frame = +1
Query: 346 QMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRG 525
Q + + Q + FQ E +M ++ SLY + E+F+RELISN SDAL+K R L +G
Sbjct: 34 QRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL--KG 91
Query: 526 VLEANPELSIRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFL 678
+ P IRI DKR + D+G+GM R DL+ LGTIAKSG+ DF+
Sbjct: 92 DVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFI 141
>AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock
protein 75 protein.
Length = 222
Score = 94.7 bits (225), Expect = 6e-20
Identities = 49/111 (44%), Positives = 67/111 (60%)
Frame = +1
Query: 346 QMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRG 525
Q + + Q + FQ E +M ++ SLY + E+F+RELISN SDAL+K R L +G
Sbjct: 34 QRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL--KG 91
Query: 526 VLEANPELSIRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFL 678
+ P IRI DKR + D+G+GM R DL+ LGTIAKSG+ DF+
Sbjct: 92 DVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFI 141
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 33.1 bits (72), Expect = 0.20
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Frame = +1
Query: 259 GSSREGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKLIINSLYR 438
G G D ++V EEE I D L + + +RD + E+ R K + S +
Sbjct: 122 GRRGRGDAADDDSVPMEEEDIPVDILENIRGRTIRDHVSDEAVAKEIERRFKNFLRSFHE 181
Query: 439 --NKEI-FLRELISNGSDALDKIRLMSLTDRGVLEANPELSIRIKAEPDKRLLHIID 600
NK+ +++ + S +D + + +S TD +S + P++ +L I+D
Sbjct: 182 PGNKQTKYIQMIKSMAADNRESLE-VSFTDLSDDNGEQNISYFLPEAPNE-MLAIMD 236
>U29381-3|AAA68758.2| 617|Caenorhabditis elegans Hypothetical
protein F35D11.3 protein.
Length = 617
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 310 EEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKL 417
E SPD V Q + LR + YT + E N +M+L
Sbjct: 316 ESDTSPDQAFVHQWRHLRHTKEQYTLRYESNYLMEL 351
>Z81461-9|CAB62796.1| 597|Caenorhabditis elegans Hypothetical
protein C04F12.3 protein.
Length = 597
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 654 GDGAEVVDEVGARHADAGVDDVQQPLVGLGLDADAE 547
G G + DE G V +V P++GL LD A+
Sbjct: 340 GSGTNIEDESGETALSLAVKNVNYPVIGLLLDNGAD 375
>AF348169-1|AAK37547.1| 597|Caenorhabditis elegans IKB-1 protein.
Length = 597
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 654 GDGAEVVDEVGARHADAGVDDVQQPLVGLGLDADAE 547
G G + DE G V +V P++GL LD A+
Sbjct: 340 GSGTNIEDESGETALSLAVKNVNYPVIGLLLDNGAD 375
>Z46240-2|CAA86311.1| 213|Caenorhabditis elegans Hypothetical
protein B0272.2 protein.
Length = 213
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 412 KLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGV 528
+L++N ++ L +LIS GS L+ ++ L RGV
Sbjct: 123 ELLLNDRLQSSHTHLDDLISQGSAVLENLKSQHLNLRGV 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,148,335
Number of Sequences: 27780
Number of extensions: 217107
Number of successful extensions: 690
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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