Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_H14
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    31   0.011
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.7  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.7  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 31.1 bits (67), Expect = 0.011
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
 Frame = -1

Query: 446 FWKYHI---REMWNLQLFRVSAELTKLVVISLANHLSGTHTG*YTADIIRNMPRTKFNGL 276
           F KYH     ++W+ QLF   A +  L V+    HL   +     + I  N+P  + N +
Sbjct: 86  FMKYHFFGTLKLWS-QLFSTFAGIEVLHVVKQCYHLQKINV--QQSGIFINLPFLEHNLI 142

Query: 275 RIRRMTTGINICFFWSKHFG 216
           R++      N  F W+  FG
Sbjct: 143 RLKNCVIYFNRIFGWNILFG 162


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 314 CQPYTTQYVCH 346
           CQ +TT Y CH
Sbjct: 76  CQDHTTHYTCH 86


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 226 NILAR*IYFQLINNKSFG*LLVIIT*CFTLIFVI 125
           N+  R  YF+L   K+F  L+  +  C   IFV+
Sbjct: 390 NLKYRETYFRLSKTKTFCTLVTALVYCSLAIFVL 423


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = -1

Query: 224 HFGTLDIFSADKQQEFW 174
           HFG   ++++ K++ +W
Sbjct: 142 HFGATKVYNSMKREYYW 158


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 474 RFYVLMLICFLEIPYQGNVES 412
           +F  L    FLEI  QG VES
Sbjct: 324 QFIYLRTFGFLEIDDQGTVES 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,526
Number of Sequences: 336
Number of extensions: 4169
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)