Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_H14
(806 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16621-1|ABD63204.1| 281|Caenorhabditis elegans Hypothetical pr... 130 2e-30
Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical p... 33 0.32
AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical ... 33 0.32
U00065-4|AAA50736.1| 103|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL032656-4|CAB60309.2| 407|Caenorhabditis elegans Hypothetical ... 29 3.9
Z47357-3|CAA87422.1| 360|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF016668-6|AAB66090.1| 275|Caenorhabditis elegans Hypothetical ... 29 5.2
U21323-12|AAA62554.2| 354|Caenorhabditis elegans Hypothetical p... 28 6.8
AF038618-3|AAB92073.1| 572|Caenorhabditis elegans Hypothetical ... 28 9.0
>L16621-1|ABD63204.1| 281|Caenorhabditis elegans Hypothetical
protein ZK688.9 protein.
Length = 281
Score = 130 bits (313), Expect = 2e-30
Identities = 75/196 (38%), Positives = 105/196 (53%), Gaps = 5/196 (2%)
Frame = +3
Query: 234 EETNVDAGRHTSNSQSIEFGPWHISYDVSRILPSMCATKVVCERDDDQFCQFCTYSKELK 413
+E V A ++ + + G + IL S C E +D C C Y +ELK
Sbjct: 8 DEVMVRAAKNAKREEKFDLGFFKFISLAGHILESSCKHS---EDQEDPSCLKCKYDRELK 64
Query: 414 IPHFPDMVFPKNRLTLAHKSGASINFNPLDALKRV-ASTVEPVEVSCSEVWMQARP---- 578
+ P+MVF +N LT+ SI FN LDALK V A + V+V S VW AR
Sbjct: 65 LEERPEMVFARNSLTIQFGRLGSIEFNALDALKMVCADRLPDVKVGASTVWQSARQDRIQ 124
Query: 579 YAEKLKKSFDWTFCTDYKGSISDNITVWETEESIDFELLKQKNQILFYHDLTLFEDELHD 758
+ +K FDWT+ T YKG+++ V T E ID E LK++++ILF +TLFEDEL D
Sbjct: 125 QISEHQKPFDWTYTTHYKGTVT-GCQVTPTTERIDMERLKRRDEILFSSSITLFEDELAD 183
Query: 759 HGVSKLSVKIXVMPSY 806
HG+++L ++ VM Y
Sbjct: 184 HGIAQLLARVRVMRGY 199
>Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical
protein Y102A5A.1 protein.
Length = 1274
Score = 32.7 bits (71), Expect = 0.32
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 160 LLIINQNSCCLSAENISNVPKCFDQKKQMLMPVVIRLIRSPL 285
L I NQ CCL+ + N P C Q ++ +IRL+ SPL
Sbjct: 733 LQITNQAFCCLTYAFL-NFPTCVSLHMQPILDSIIRLLTSPL 773
>AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical
protein Y102A5A.1 protein.
Length = 1274
Score = 32.7 bits (71), Expect = 0.32
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 160 LLIINQNSCCLSAENISNVPKCFDQKKQMLMPVVIRLIRSPL 285
L I NQ CCL+ + N P C Q ++ +IRL+ SPL
Sbjct: 733 LQITNQAFCCLTYAFL-NFPTCVSLHMQPILDSIIRLLTSPL 773
>U00065-4|AAA50736.1| 103|Caenorhabditis elegans Hypothetical
protein D1044.4 protein.
Length = 103
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -3
Query: 399 SKCRTDKIGRHLSRKPP*WHTYWVVYG*HH 310
S+C+ + + +H + P HTY ++YG H
Sbjct: 58 SECKDEDVEKHFEKVMPCVHTYTIIYGNVH 87
>AL032656-4|CAB60309.2| 407|Caenorhabditis elegans Hypothetical
protein Y106G6E.6 protein.
Length = 407
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 342 ATKVVCERDDDQFCQFCTYSKELKIPHFPDMVFPKNRL-TLAHKSGASINF 491
A +V+CE D+F Q+ Y++ L PD F N ++ + GA+ ++
Sbjct: 257 AVEVLCEGFPDEFAQYLRYARRLDFFETPDYDFCYNLFKSVLDRLGATYDY 307
>Z47357-3|CAA87422.1| 360|Caenorhabditis elegans Hypothetical
protein ZK1128.3 protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 318 SRILPSMCATKVVCERDDDQFCQFCTYSKELKIPHFPDMVFPKNRLTL 461
+RI S+C ++V+C D Q ++ +++ H P M P L
Sbjct: 240 NRITVSICLSRVICVEDYLSAVQKVMNTRTVQLDHIPSMDLPSLHFAL 287
>AF016668-6|AAB66090.1| 275|Caenorhabditis elegans Hypothetical
protein F36H9.2 protein.
Length = 275
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = +3
Query: 366 DDDQFC--QFCTYSKELKIPHFPDM 434
DDD FC QFC YS++L F D+
Sbjct: 112 DDDNFCFGQFCRYSRQLVPNDFGDV 136
>U21323-12|AAA62554.2| 354|Caenorhabditis elegans Hypothetical
protein C45G9.11 protein.
Length = 354
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 136 IFVIAFKSFYIKLKXTSKYTPNTFSVTVSPI*CLFMYLFLYQ 11
IF F++ S +P S+T +PI CL ++ FLYQ
Sbjct: 285 IFSFFINFFFLIFSIWSLVSPG--SLTFTPINCLLIFCFLYQ 324
>AF038618-3|AAB92073.1| 572|Caenorhabditis elegans Hypothetical
protein F42G8.7 protein.
Length = 572
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +3
Query: 576 PYAEKLKKSFDWTFCTDYKGSISDNITVWETEESIDFELLKQKNQILFYHDLTLF 740
P++ KL SF DY+ D TVW + + + L K I + + +F
Sbjct: 27 PFSRKLMSSFSQA-AADYQAKYPDRKTVWGNVDCMAEDYLMNKYSITKFPTMKVF 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,457,987
Number of Sequences: 27780
Number of extensions: 363074
Number of successful extensions: 871
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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