Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_H13
         (849 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.19 
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    24   1.3  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    23   3.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   9.3  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   9.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.3  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 535 TCQMVLKQLKLGYKPCPLVTTNRTRTVNQSSKISLQF 645
           TC M+  +  +  KP  +  TNR  ++   +KIS  F
Sbjct: 67  TCNMLCSEPAIWPKPVHIKLTNRESSIIDKTKISFNF 103


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 321 PSYAPPISSADPYSAAGYY 377
           P+Y+PP S  DP+    YY
Sbjct: 25  PAYSPPPSYCDPWYNPYYY 43


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 639 KRYL*ALVDGPCPVCGHQGTGLVPQL 562
           K+ L AL   PC   G+Q  G +P++
Sbjct: 34  KQLLCALDKAPCDALGNQIKGALPEI 59


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 79  IMSKMSVVYKNSHNIRHK 26
           + S+ S V KN+  +RHK
Sbjct: 260 VRSEASKVVKNAQKLRHK 277


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 618 VDGPCPVCGHQGTGLVP 568
           +D P  + GH G GL+P
Sbjct: 1   MDDPGRMMGHTGGGLMP 17


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +3

Query: 294 EVPWRHQQQPSYAPPISSADPYSAAG 371
           +V   H Q P Y   ++   PY   G
Sbjct: 368 DVSCTHYQNPEYISVVNPESPYPQIG 393


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,741
Number of Sequences: 336
Number of extensions: 4357
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)