Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_H13
         (849 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    26   1.7  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.9  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   2.9  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   2.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.9  

>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = +3

Query: 177 LKSRPMSAGVSDQRMKGQGNQVTNAPKEQHLESGGDELAEVPWRHQQQPSYAPPI 341
           L+ + ++     +R++ Q  Q T+  ++QH  S   +  + P    QQPS +  I
Sbjct: 230 LRDKELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPSRSASI 284


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/51 (23%), Positives = 26/51 (50%)
 Frame = +3

Query: 177 LKSRPMSAGVSDQRMKGQGNQVTNAPKEQHLESGGDELAEVPWRHQQQPSY 329
           L+ + ++     +R++ Q  Q T+  ++QH  S   +  + P    QQP++
Sbjct: 230 LRDKELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTH 280


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/51 (23%), Positives = 26/51 (50%)
 Frame = +3

Query: 177 LKSRPMSAGVSDQRMKGQGNQVTNAPKEQHLESGGDELAEVPWRHQQQPSY 329
           L+ + ++     +R++ Q  Q T+  ++QH  S   +  + P    QQP++
Sbjct: 230 LRDKELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTH 280


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/51 (23%), Positives = 26/51 (50%)
 Frame = +3

Query: 177 LKSRPMSAGVSDQRMKGQGNQVTNAPKEQHLESGGDELAEVPWRHQQQPSY 329
           L+ + ++     +R++ Q  Q T+  ++QH  S   +  + P    QQP++
Sbjct: 182 LRDKELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTH 232


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +2

Query: 602  GQGPSTRAQRYLFSFTTQKDDLGVNCQSAGKAGAFFAERRNKEER 736
            GQ   +    +    ++ KD  G    S+GK G FF  + N +++
Sbjct: 1249 GQYIRSACSNHYGDHSSGKDPTGAG-SSSGKGGGFFDRKSNHQQQ 1292


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 893,641
Number of Sequences: 2352
Number of extensions: 19081
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)