Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_H12
(542 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 85 3e-19
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 85 5e-19
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 67 1e-13
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 64 6e-13
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 85.4 bits (202), Expect = 3e-19
Identities = 41/77 (53%), Positives = 50/77 (64%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 329 VQGGSVLHLVLALRGGE 379
+Q S LHLVL LRGG+
Sbjct: 669 IQKESTLHLVLRLRGGQ 685
Score = 84.6 bits (200), Expect = 5e-19
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 84.6 bits (200), Expect = 5e-19
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 84.6 bits (200), Expect = 5e-19
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 84.6 bits (200), Expect = 5e-19
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 84.6 bits (200), Expect = 5e-19
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 84.6 bits (200), Expect = 5e-19
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 84.6 bits (200), Expect = 5e-19
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 82.2 bits (194), Expect = 3e-18
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++EP+D GIPP QQR IF+GKQ+ D +T DY
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 440
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 84.6 bits (200), Expect = 5e-19
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 66.9 bits (156), Expect = 1e-13
Identities = 31/62 (50%), Positives = 39/62 (62%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 329 VQ 334
+Q
Sbjct: 61 IQ 62
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 64.5 bits (150), Expect = 6e-13
Identities = 30/62 (48%), Positives = 38/62 (61%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++EP+D GIPP QQR IF+GKQ+ D +T DY
Sbjct: 49 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 108
Query: 329 VQ 334
+Q
Sbjct: 109 IQ 110
Score = 63.3 bits (147), Expect = 1e-12
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +2
Query: 251 GIPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 376
GIPP QQRLIF+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 7 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 48
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,445
Number of Sequences: 336
Number of extensions: 1592
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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