Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_H12
(542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 113 6e-26
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 82 2e-16
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 82 2e-16
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 81 4e-16
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 81 4e-16
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 81 4e-16
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 55 3e-08
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 32 0.31
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 32 0.31
AF074395-1|AAC26791.1| 365|Caenorhabditis elegans CET-1 protein. 31 0.54
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 30 0.94
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 30 0.94
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 29 2.2
U64856-2|AAB04986.2| 365|Caenorhabditis elegans Dpp/bmp-like pr... 29 2.9
AF004395-1|AAC27729.1| 365|Caenorhabditis elegans decapentapleg... 29 2.9
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 28 5.0
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z72509-2|CAA96646.1| 520|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 113 bits (273), Expect = 6e-26
Identities = 56/76 (73%), Positives = 59/76 (77%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
MLIKVKTLTGKEIE+DIEP D GIPP QQRLIF+GKQMND+KTA DYK
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 329 VQGGSVLHLVLALRGG 376
V GGSVLHLVLALRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 82.2 bits (194), Expect = 2e-16
Identities = 40/77 (51%), Positives = 49/77 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 329 VQGGSVLHLVLALRGGE 379
+Q S LHLVL LRGG+
Sbjct: 821 IQKESTLHLVLRLRGGD 837
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 79.0 bits (186), Expect = 2e-15
Identities = 39/76 (51%), Positives = 47/76 (61%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTL GK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 82.2 bits (194), Expect = 2e-16
Identities = 40/77 (51%), Positives = 49/77 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 329 VQGGSVLHLVLALRGGE 379
+Q S LHLVL LRGG+
Sbjct: 821 IQKQSTLHLVLRLRGGD 837
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 79.0 bits (186), Expect = 2e-15
Identities = 39/76 (51%), Positives = 47/76 (61%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTL GK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSG 289
M I VKTLTGK I +++E +D GIPP QQRLIF+G
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 328
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 329 VQGGSVLHLVLALRGG 376
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +2
Query: 146 KMLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDY 325
K+ + VKTL GK I I I+ TD G+PP QQRLIF Q+ +++ Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 326 KVQGGSVLHLV 358
++ ++HLV
Sbjct: 220 NIRDEDIIHLV 230
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 31.9 bits (69), Expect = 0.31
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 263 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 361
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.31
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 263 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 361
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 31.9 bits (69), Expect = 0.31
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 263 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 361
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.31
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 263 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 361
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.31
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 263 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 361
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 31.9 bits (69), Expect = 0.31
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 263 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 361
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.31
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 263 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 361
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>AF074395-1|AAC26791.1| 365|Caenorhabditis elegans CET-1 protein.
Length = 365
Score = 31.1 bits (67), Expect = 0.54
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 193 RYRTHRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 297
R + RQ+G ++RK+R+KGR H S++ R+T+
Sbjct: 233 RRKRSRQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 30.3 bits (65), Expect = 0.94
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 152 LIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYKV 331
++ VKTL + + +++ + GIP ++QRL ++G+Q+ D D +
Sbjct: 1 MVFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGI 55
Query: 332 QGGSVLHLVLALRGG 376
+ +++ L L GG
Sbjct: 56 DSEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 30.3 bits (65), Expect = 0.94
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 152 LIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYKV 331
++ VKTL + + +++ + GIP ++QRL ++G+Q+ D D +
Sbjct: 1 MVFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGI 55
Query: 332 QGGSVLHLVLALRGG 376
+ +++ L L GG
Sbjct: 56 DSEATIYVNLELLGG 70
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 149 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIP 259
M I VKTLTGK I +++E +D GIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>U64856-2|AAB04986.2| 365|Caenorhabditis elegans Dpp/bmp-like
protein 1 protein.
Length = 365
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 193 RYRTHRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 297
R + Q+G ++RK+R+KGR H S++ R+T+
Sbjct: 233 RRKRSAQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268
>AF004395-1|AAC27729.1| 365|Caenorhabditis elegans decapentaplegic
protein homolog protein.
Length = 365
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 193 RYRTHRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 297
R + Q+G ++RK+R+KGR H S++ R+T+
Sbjct: 233 RRKRSAQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/60 (21%), Positives = 29/60 (48%)
Frame = +2
Query: 170 LTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVL 349
L G I ++++ D G+ +QRL+ + K++ +T ++ ++ GSV+
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 254 IPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVL 349
IP L FSGK++ D + DY +Q S +
Sbjct: 188 IPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTI 219
>Z72509-2|CAA96646.1| 520|Caenorhabditis elegans Hypothetical
protein F32G8.2 protein.
Length = 520
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -2
Query: 361 QNKMKY*TSLNFVILSCLLIIHL 293
+N++K SL F ILSCLLII +
Sbjct: 6 KNQVKIFPSLIFAILSCLLIIFI 28
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,675,489
Number of Sequences: 27780
Number of extensions: 144493
Number of successful extensions: 472
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -