Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_H10
         (809 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    29   0.033
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    24   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.0  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   6.6  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   6.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   6.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.8  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   8.8  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 29.5 bits (63), Expect = 0.033
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = +3

Query: 90  ITSTWSST*TYFVPIKTVIQIKFEKIRRRDLKMLPLXDAVVEQDTLWRKLRHEADNFNKL 269
           IT  W+    + + I T +  +F +I RR   +  +    ++ + +W+KLR +     +L
Sbjct: 221 ITFIWTYNDLFVMLISTALAYRFGQITRR---IAAVASEKIKNEIIWKKLREDYTRQCRL 277

Query: 270 KNVCSKEI 293
                KEI
Sbjct: 278 VRKVDKEI 285


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = +3

Query: 162 KIRRRDLKMLPLXDAVVEQDTLWRKLRHE 248
           ++++ + K+  L +A V+   LW++LR+E
Sbjct: 119 RLKQLNAKVEMLKNARVKNTALWKQLRYE 147


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 328  EPLGSLFFIFKPISLLHTFFSLL 260
            EP+G +F IF  + ++  FF+++
Sbjct: 1281 EPIGFVFLIFFALLMVIQFFAMM 1303


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 328  EPLGSLFFIFKPISLLHTFFSLL 260
            EP+G +F IF  + ++  FF+++
Sbjct: 1281 EPIGFVFLIFFALLMVIQFFAMM 1303


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 190 NIFKSLLLIFSNFIWIT 140
           N++  LLL+F  ++WI+
Sbjct: 121 NLYMVLLLLFDAYLWIS 137


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = -1

Query: 590 AVSVCPFYQVMVFIIINWYRLMQMISNFPECSGTRFLSSQ 471
           A    P    +VF ++  Y + Q + NF     + F  S+
Sbjct: 345 AAGFFPINYTLVFSVLKQYVMQQQVKNFRHSVRSVFFLSE 384


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 306 KNKEPSGSEDEPVPSEIANN 365
           KN+E +G    P P E++N+
Sbjct: 147 KNEEVAGGFTCPAPGEVSNS 166


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 306 KNKEPSGSEDEPVPSEIANN 365
           KN+E +G    P P E++N+
Sbjct: 147 KNEEVAGGFTCPAPGEVSNS 166


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 32  TCLIILKNISTYVIYLS*INNVNMV 106
           TC  I+  ++TY++ L   NN + V
Sbjct: 348 TCEEIVAGVTTYLVILIQFNNSDFV 372


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/32 (21%), Positives = 16/32 (50%)
 Frame = -2

Query: 244 WRNFLHKVSCSTTASXKGNIFKSLLLIFSNFI 149
           WR++  +  C        N+F  L L++++ +
Sbjct: 334 WRSYCIQPPCGQLNPINPNVFDVLKLLYNDIV 365


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 213 EQDTLWRKLRHEADNFNKLKNV 278
           EQ+TL  +++ E+D  + LK+V
Sbjct: 352 EQETLKSQVQRESDVVDSLKDV 373


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/49 (18%), Positives = 23/49 (46%)
 Frame = +3

Query: 240 RHEADNFNKLKNVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGD 386
           R+     N   +VC  ++ ++  +     ++ EPV     N +++ +G+
Sbjct: 343 RYRFRMINSFASVCPAQLTIQGHDLTLIATDGEPVHPVRVNTIISFSGE 391


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/49 (18%), Positives = 23/49 (46%)
 Frame = +3

Query: 240 RHEADNFNKLKNVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGD 386
           R+     N   +VC  ++ ++  +     ++ EPV     N +++ +G+
Sbjct: 343 RYRFRMINSFASVCPAQLTIQGHDLTLIATDGEPVHPVRVNTIISFSGE 391


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 17/65 (26%), Positives = 28/65 (43%)
 Frame = -3

Query: 369 PGYWRSPRGRVRLQSHWVPCSSFSNQFLCYIHSSVY*NCQLRGAISSTRCLARRLHPXRA 190
           PG      G   +++ WVP + F N+   Y H +   N  +R   S +   + RL    +
Sbjct: 107 PGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITAS 166

Query: 189 TSLNL 175
             +NL
Sbjct: 167 CPMNL 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,012
Number of Sequences: 336
Number of extensions: 3498
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)