Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_H10
(809 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726... 109 2e-24
03_02_0031 + 5134889-5135021,5135109-5135179,5135267-5135428,513... 75 7e-14
11_06_0371 + 22774245-22774413,22774504-22774670,22775538-227756... 45 6e-05
04_04_0279 - 24109592-24111346,24111457-24111551,24113210-24113348 37 0.017
01_06_0376 - 28863574-28863594,28863758-28864357,28865303-28865812 36 0.029
01_02_0002 + 10059518-10059949,10060134-10060202,10060344-100604... 32 0.47
10_08_0845 - 20968051-20968188,20968769-20968843,20969399-209694... 30 2.5
07_03_0337 + 16918613-16919078,16921610-16921725,16922039-169222... 29 3.3
04_04_0919 - 29422003-29422267,29422411-29422660,29423163-294234... 29 3.3
07_01_0039 - 306384-306551,306645-306749,306845-306949,307030-30... 29 4.4
03_05_0291 - 22837412-22838128 29 4.4
02_05_0154 - 26330109-26330189,26330274-26330411,26330518-263306... 29 4.4
03_01_0013 - 105281-105552,105762-105838,105839-106524,106655-10... 29 5.8
12_02_0208 + 15549411-15549740 28 7.6
11_08_0039 - 27884947-27885077,27885211-27886317,27886437-278866... 28 7.6
03_05_0532 - 25322822-25322932,25323018-25323050,25323187-253232... 28 7.6
01_06_0159 + 27089006-27089064,27089925-27090007,27090414-270905... 28 7.6
>01_05_0344 +
21172101-21172233,21172332-21172402,21172492-21172653,
21172995-21173100,21174242-21174439,21174565-21174631,
21174868-21175051,21175145-21175324,21175408-21175587,
21176472-21176627,21177487-21178067,21178535-21178640,
21179152-21179331,21179620-21179892
Length = 858
Score = 109 bits (263), Expect = 2e-24
Identities = 78/205 (38%), Positives = 107/205 (52%), Gaps = 1/205 (0%)
Frame = +3
Query: 195 LXDAVVEQDTLWRKLRHEADNFNKLKNVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVN 374
L D V+ D WR+ + E D + N SKEIG K+K K+ E A+ L+
Sbjct: 31 LVDEVIALDDQWRQRQFELDKIRQELNKTSKEIG-KLKAKK-----------EDASALIQ 78
Query: 375 LTGDNLKPLTVNQIKKVRVLIDNAISKNDEGLLAAEKARSAALREVGNHLHESVPVDDDE 554
T +IKK ++ + + A+ A L +GN +HESVPV DDE
Sbjct: 79 ST---------EEIKK-------RLAAKETEVQEAKGTLDAKLVTIGNIVHESVPVSDDE 122
Query: 555 DHNLVERTDGDCGFRKKY-SHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVFLXQALVQ 731
+NL+ RT G+ +HVDL M+D + E+G+ VAGGRGYYLK V L AL+
Sbjct: 123 ANNLIVRTWGERRLEGNLKNHVDLCKMLDIVALEKGADVAGGRGYYLKDEGVLLNLALIN 182
Query: 732 LSLXMLLEKGYTPLYTPFFMRKEVM 806
L L ++G+ P+ TPFFMRKE M
Sbjct: 183 FGLAFLRKRGFKPMQTPFFMRKETM 207
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 104 VLDLDLFRADKDGNPDKIRENQKKRFKDVAL 196
+LD++LFR +K G+P+ IR +Q+ R V L
Sbjct: 1 MLDINLFRTEKGGDPELIRRSQRNRSASVEL 31
>03_02_0031 +
5134889-5135021,5135109-5135179,5135267-5135428,
5135786-5135891,5136385-5136429,5136850-5136946,
5137027-5137210,5137304-5137483,5137567-5137770
Length = 393
Score = 74.9 bits (176), Expect = 7e-14
Identities = 63/179 (35%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Frame = +3
Query: 162 KIRRRDLKMLPLXDAVVEQDTLWRKLRHEADNFNKLKNVCSKEIGLKMKNKEPSGSEDEP 341
K +R + L D V+ D WR+ + E D + N SKEIG K+K K+
Sbjct: 20 KSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTSKEIG-KLKAKK-------- 70
Query: 342 VPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKNDEGLLAAEKARSAALREVGNH 521
E A+ L+ T +IKK ++ + + A+ A L +GN
Sbjct: 71 ---EDASALIQST---------EEIKK-------RLAAKETEVQEAKGTLDAKLVTIGNI 111
Query: 522 LHESVPVDDDEDHNLVERTDGDCGFRKKY-SHVDLICMIDGMDGERGSAVAGGRGYYLK 695
+HESVPV DDE +NL+ RT G+ +HVDL M+D + E+G VAGGRGYYLK
Sbjct: 112 VHESVPVSDDEANNLIVRTWGEKRMEGNLKNHVDLCKMLDIVALEKGVDVAGGRGYYLK 170
Score = 34.7 bits (76), Expect = 0.088
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +2
Query: 104 VLDLDLFRADKDGNPDKIRENQKKRFKDVAL 196
+LD++LFR +K G+P+ IR++Q+ R V L
Sbjct: 1 MLDINLFRTEKGGDPELIRKSQRNRSASVEL 31
>11_06_0371 +
22774245-22774413,22774504-22774670,22775538-22775631,
22775723-22775871,22775950-22776042,22776167-22776235,
22776236-22776415,22776465-22776518,22776739-22776905,
22777180-22777314,22777386-22777479,22777567-22777848
Length = 550
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 666 VAGGRGYYLKGPAVFLXQALVQLSLXMLLEKGYTPLYTPFFMRKEVM 806
V+G + YYLK AV L ALV ++ + +KG+TPL TP +R V+
Sbjct: 248 VSGSKFYYLKNEAVLLEMALVNWAITEVSKKGFTPLITPEIVRSSVV 294
>04_04_0279 - 24109592-24111346,24111457-24111551,24113210-24113348
Length = 662
Score = 37.1 bits (82), Expect = 0.017
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 282 SKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRV-LIDNAISKN 458
SK G KN++ + + + VPS+++N LVN G+N P T++ K++ V +I+ S
Sbjct: 44 SKREGAGGKNEQYNLEDVDSVPSKMSNKLVN--GNNKVPATLDDYKRLLVPVIEEYFSTG 101
Query: 459 DEGLLAAE 482
D L A+E
Sbjct: 102 DVELAASE 109
>01_06_0376 - 28863574-28863594,28863758-28864357,28865303-28865812
Length = 376
Score = 36.3 bits (80), Expect = 0.029
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = +3
Query: 306 KNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKNDEGLLAAEK 485
KN EP P + NNL + D+L +N + V++L+D A + D+ K
Sbjct: 185 KNTEPRQKRKNPRTAMEVNNLADELLDSLGVYLINNVDDVKILLDAARADLDDNAAHLAK 244
Query: 486 ARSAALREVGNHLHE 530
AR A LR V + E
Sbjct: 245 AR-ARLRNVRRLVRE 258
>01_02_0002 +
10059518-10059949,10060134-10060202,10060344-10060426,
10061842-10061894,10062056-10062177,10062354-10062387,
10062472-10062632,10062879-10062956,10063038-10063178
Length = 390
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 489 RSAALREVGNHLHESVPVDDDEDHNLVERTDGDCGF 596
+SAA + V LH++ DDD+D +L+ DCGF
Sbjct: 244 QSAAEQYVSEFLHKA---DDDDDESLIPNAKNDCGF 276
>10_08_0845 -
20968051-20968188,20968769-20968843,20969399-20969425,
20969512-20969649,20969765-20969880,20970000-20970081,
20970105-20970226,20970314-20970368
Length = 250
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 252 DNFNKLKNVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRV 431
+ FNK + +E+ LK+ PSGS D+ + + + L D+L L I+K++
Sbjct: 124 NTFNKEVDKVIEEMKLKVVYTVPSGSSDDSGITSLGSRSFKLGSDDLTMLKNASIEKIQT 183
Query: 432 L 434
+
Sbjct: 184 I 184
>07_03_0337 +
16918613-16919078,16921610-16921725,16922039-16922208,
16922509-16922602,16923371-16923457,16923529-16923609,
16923800-16923925,16924541-16924649,16924723-16924802,
16925401-16925529,16925605-16925705,16926075-16926208,
16926307-16926404,16926488-16926607,16927008-16927022,
16927930-16927957,16928066-16928118,16928446-16928517,
16928605-16928652,16928928-16929033,16929110-16929168,
16929792-16929887,16929942-16929959
Length = 801
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Frame = +3
Query: 141 VIQIKF-EKIRRRDLKMLP----LXDAVVEQDTLWRKLRHEADNFNKLKNVCSKEIGLKM 305
+ Q K+ E+I RDL + L + + + D+L K E +++ K NV S E ++
Sbjct: 508 IAQSKYGEEIEARDLALADSDKKLKNVMAKLDSLTSKFLSEKESWEK--NVASVEESWRL 565
Query: 306 KNKEPSGSEDEPVPSEIANNLVNLT 380
K + + E+ NLV LT
Sbjct: 566 KCESVKAESNGHAGDELKKNLVELT 590
>04_04_0919 -
29422003-29422267,29422411-29422660,29423163-29423481,
29423625-29424794,29424879-29425388,29425449-29425607
Length = 890
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Frame = +3
Query: 252 DNFNKL--KNVCSKE---IGLKMKNKEPSGSEDEPVPSEIANNL 368
+NF KL KN + + +G+ MK K+P GS+ V S++ NL
Sbjct: 471 ENFRKLLSKNSAAGDEVLVGIFMKEKKPDGSDGGVVHSDLVRNL 514
>07_01_0039 -
306384-306551,306645-306749,306845-306949,307030-307111,
307457-307656,307754-307915,308043-308152,308255-308594,
308675-308749,308823-309032,309140-309343,309443-309562,
309643-309752,309832-309976,310716-310943
Length = 787
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 423 VRVLIDNAISKNDEGLLAAEKARSAALREVGNHLHESVPVDDDEDHNLVE 572
V++ +D A S +E L K ++ L+EV N E V DD DH L E
Sbjct: 261 VKMQLDLAKSSQNEAL----KQKTDLLKEVDNLRGELQQVRDDRDHKLAE 306
>03_05_0291 - 22837412-22838128
Length = 238
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 627 CMIDGMDGERGSAVAGGRGYYLKGPAVFLXQALVQLSLXMLLEK 758
C +G G G A GRG+ L PAV L + + L E+
Sbjct: 176 CHYEGPIGSGGGAAVAGRGFDLNLPAVALPDIMTERCLPAAAEE 219
>02_05_0154 -
26330109-26330189,26330274-26330411,26330518-26330633,
26330782-26330863,26332706-26332770,26333016-26333112,
26334066-26334136,26334242-26334304,26334379-26334431,
26335143-26335192,26336295-26336340,26337014-26337019,
26337381-26337511,26337594-26337680,26338472-26338849
Length = 487
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 252 DNFNKLKNVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRV 431
D FNK + +EI LK+ PSGS D+ + + + D+ L I++V
Sbjct: 414 DTFNKEVDKVIEEIKLKVVYTVPSGSSDDSGITSLGSRSFKSLSDDFTMLKNASIEEVMQ 473
Query: 432 LI 437
LI
Sbjct: 474 LI 475
>03_01_0013 -
105281-105552,105762-105838,105839-106524,106655-106738,
106914-107114,107202-107309,107766-107855,108505-108551,
109096-109276,110010-110135,110220-110386,110877-111072
Length = 744
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 90 ITSTWSST*TYFVPIKTVIQIKFEKIRRRDLKMLPLXD 203
+T W S F P VIQ +K+ RRDL+ + D
Sbjct: 73 VTDGWLSEFNKFCPSLRVIQYVGDKLHRRDLRRMMFQD 110
>12_02_0208 + 15549411-15549740
Length = 109
Score = 28.3 bits (60), Expect = 7.6
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = -1
Query: 575 PFYQVMVFIIINWYRLMQMISNFPECSGT 489
P +M I++ W ++ ++++NFP G+
Sbjct: 81 PIVNIMTIILLFWIKICRIMTNFPTVDGS 109
>11_08_0039 -
27884947-27885077,27885211-27886317,27886437-27886681,
27886810-27886961,27887077-27887193
Length = 583
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 324 GSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVL 434
G ++ P+ A VNLTGDN +P KV+VL
Sbjct: 430 GVYEDDFPNNPAPVFVNLTGDNDRPGVTKHGAKVKVL 466
>03_05_0532 -
25322822-25322932,25323018-25323050,25323187-25323222,
25323301-25323336,25323431-25323479,25323671-25323762,
25323899-25323984,25324098-25324261,25325573-25325601,
25325697-25325807,25326471-25326512,25326597-25326647,
25326848-25326898,25327325-25327382,25327823-25327908,
25328008-25328056,25328155-25328273,25328504-25328590,
25328726-25328787,25329222-25329290,25329884-25330133
Length = 556
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Frame = +3
Query: 129 PIKTVIQIKFEKIRRRDLKMLP---LXDAVVEQDTLWRKLRHEADNFNKLKNVCSKEIGL 299
P K + + E +R D M L D +++ D + D+ ++ EI L
Sbjct: 462 PSKEALDLASEMVRDNDAAMAEIEMLNDLLLDHDIEMVETSFSVDDLQMMERELMSEIKL 521
Query: 300 KMKNKEPSGSEDEPVPSEIANNLVNLTG 383
N E S S + ++AN +LTG
Sbjct: 522 IEHNFEISESALDEYMDDLANYAFDLTG 549
>01_06_0159 +
27089006-27089064,27089925-27090007,27090414-27090588,
27091442-27091592,27091629-27091752,27092378-27092446,
27093197-27093291
Length = 251
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +2
Query: 146 PDKIRENQKKRFKDVALXGCSRRARH---LVEEIAPR 247
P + R ++ +R +DV + GC RR+R ++ E+A +
Sbjct: 82 PGRERSSEPRRRRDVVVYGCDRRSRSASPIISELAKK 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,102,958
Number of Sequences: 37544
Number of extensions: 391454
Number of successful extensions: 1280
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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