Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_H10
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-1|CAA93105.1| 487|Caenorhabditis elegans Hypothetical pr... 226 1e-59
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr... 31 1.3
U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical pr... 30 2.3
AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical... 29 5.2
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 29 5.2
AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical... 29 5.2
AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical... 29 5.2
Z70208-4|CAC42306.1| 879|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL132949-3|CAB61070.1| 179|Caenorhabditis elegans Hypothetical ... 28 6.9
AF200707-1|AAF15884.1| 879|Caenorhabditis elegans UNC-84B protein. 28 6.9
AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein. 28 6.9
Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical pr... 28 9.1
AF026209-13|AAB71271.2| 351|Caenorhabditis elegans Seven tm rec... 28 9.1
>Z68882-1|CAA93105.1| 487|Caenorhabditis elegans Hypothetical
protein C47E12.1 protein.
Length = 487
Score = 226 bits (553), Expect = 1e-59
Identities = 113/204 (55%), Positives = 137/204 (67%)
Frame = +3
Query: 195 LXDAVVEQDTLWRKLRHEADNFNKLKNVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVN 374
L D V+E D WRK R AD N+ KN SK IG KMK KEP G++D V +I L
Sbjct: 32 LVDEVIELDEKWRKERFVADQLNRQKNAISKAIGEKMKKKEPQGTDDS-VADDIVARLAE 90
Query: 375 LTGDNLKPLTVNQIKKVRVLIDNAISKNDEGLLAAEKARSAALREVGNHLHESVPVDDDE 554
L D L LTV Q+KK+RVL+D + ++A E AR L ++GN +H SV V DE
Sbjct: 91 LKIDELSQLTVVQLKKLRVLVDEKSVQTAAAVIANENARHEKLIQIGNLIHSSVVVSKDE 150
Query: 555 DHNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVFLXQALVQL 734
+N +ERT GD +KKYSHVDL+ M+DG DGERG+ VAGGRGY+LKGP VFL QA++QL
Sbjct: 151 ANNKIERTFGDLSTKKKYSHVDLVVMVDGFDGERGTVVAGGRGYFLKGPLVFLEQAIIQL 210
Query: 735 SLXMLLEKGYTPLYTPFFMRKEVM 806
+L L KGY PLYTPFFMRKEVM
Sbjct: 211 ALQRLNVKGYVPLYTPFFMRKEVM 234
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +2
Query: 101 MVLDLDLFRADKDGNPDKIRENQKKRFKDVAL 196
MVLD+D+FR +K GNP+ IR++Q+ RFKD L
Sbjct: 1 MVLDIDMFRTEKGGNPEIIRKSQQDRFKDPKL 32
>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical protein
ZC434.5 protein.
Length = 1149
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +3
Query: 195 LXDAVVEQDTLWRKLRHEADNFNKLKNVCSKEIGLKMKNKEPSGSEDEPVPSEIA 359
L + +Q L R+L+ + + K+ +K + LK + K+ +GS+ +P P+++A
Sbjct: 1017 LSKQIDDQALLVRELKMKDAKSQETKDAIAKLLQLKKQYKDATGSDYKPAPAQLA 1071
>U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical
protein K02B2.1 protein.
Length = 457
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 450 SKNDEGLLAAEKARSAALREVGNHLHESVPVDDDEDHNL 566
S + +GL+ AE+A+ + + N+ + P+D+ ED +L
Sbjct: 171 SPDYKGLMTAEQAKEDFMNRIENYKKQYEPLDESEDESL 209
>AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical
protein Y48G1C.8 protein.
Length = 828
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 342 VPSEIANNLVNLTGDNLKPLTVN 410
VP+ N +N TGD L P TVN
Sbjct: 444 VPANFVANQINHTGDGLSPWTVN 466
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 312 KEPSGSEDEPVPSEIANNLVNLTGDNLKPL--TVNQIKKVRVLIDNAISKNDEGLLAAEK 485
K+P+G ++ E A + N+T KPL V ++ + +++ + N + AE
Sbjct: 563 KKPTGEPEQIKEEEAAEKISNITISKTKPLKKAVTKVSAAKKILNKKLKVNTKKTFGAED 622
Query: 486 ARSAALRE 509
L E
Sbjct: 623 DELEELEE 630
>AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical
protein Y110A7A.6a protein.
Length = 450
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +3
Query: 450 SKNDEGLLAAEKARSAALREVGNHLHESVPVDDDEDHNL 566
S + +G+++ E+A+ L+ + N+ + P+D+D D L
Sbjct: 172 SPDYKGIMSQEEAKEDFLKRIENYRMQYEPLDEDHDEEL 210
>AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical
protein Y110A7A.6b protein.
Length = 435
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +3
Query: 450 SKNDEGLLAAEKARSAALREVGNHLHESVPVDDDEDHNL 566
S + +G+++ E+A+ L+ + N+ + P+D+D D L
Sbjct: 178 SPDYKGIMSQEEAKEDFLKRIENYRMQYEPLDEDHDEEL 216
>Z70208-4|CAC42306.1| 879|Caenorhabditis elegans Hypothetical
protein F54B11.3b protein.
Length = 879
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = -1
Query: 599 SKAAVSVCPFYQVMVFIIINWYRLMQMISNFPECSGTRFLSSQ 471
+KAA S+ F++++V++++ YR++ +N E R + Q
Sbjct: 186 TKAARSIRRFFEILVYVVLTPYRMLTRSNNGVEQYQYRSIKDQ 228
>Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical
protein F54B11.3a protein.
Length = 1111
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = -1
Query: 599 SKAAVSVCPFYQVMVFIIINWYRLMQMISNFPECSGTRFLSSQ 471
+KAA S+ F++++V++++ YR++ +N E R + Q
Sbjct: 186 TKAARSIRRFFEILVYVVLTPYRMLTRSNNGVEQYQYRSIKDQ 228
>AL132949-3|CAB61070.1| 179|Caenorhabditis elegans Hypothetical
protein Y53F4B.3 protein.
Length = 179
Score = 28.3 bits (60), Expect = 6.9
Identities = 28/114 (24%), Positives = 47/114 (41%)
Frame = +3
Query: 300 KMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKNDEGLLAA 479
K K P E EI ++ L L PL ++KKV + + N+E L
Sbjct: 6 KTKKAAPIAQMSEEDVREIEEHVEELVRSQL-PL--GRVKKVVRMNPDVEMLNNEALQLM 62
Query: 480 EKARSAALREVGNHLHESVPVDDDEDHNLVERTDGDCGFRKKYSHVDLICMIDG 641
KA ++E+ N +++ + E V+ D D +K ++ L +DG
Sbjct: 63 AKAAELFIKELSNAANQNAAL---EKRKTVQTKDIDKAIKKTWAFAFLEDALDG 113
>AF200707-1|AAF15884.1| 879|Caenorhabditis elegans UNC-84B protein.
Length = 879
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = -1
Query: 599 SKAAVSVCPFYQVMVFIIINWYRLMQMISNFPECSGTRFLSSQ 471
+KAA S+ F++++V++++ YR++ +N E R + Q
Sbjct: 186 TKAARSIRRFFEILVYVVLTPYRMLTRSNNGVEQYQYRSIKDQ 228
>AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.
Length = 1111
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = -1
Query: 599 SKAAVSVCPFYQVMVFIIINWYRLMQMISNFPECSGTRFLSSQ 471
+KAA S+ F++++V++++ YR++ +N E R + Q
Sbjct: 186 TKAARSIRRFFEILVYVVLTPYRMLTRSNNGVEQYQYRSIKDQ 228
>Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical
protein D1081.3 protein.
Length = 752
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 167 DFLEFYLDYRLYRHEISLSRGPC 99
DF E+Y D R Y +EI G C
Sbjct: 206 DFYEYYFDLRRYNNEICAFSGVC 228
>AF026209-13|AAB71271.2| 351|Caenorhabditis elegans Seven tm
receptor protein 20 protein.
Length = 351
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 430 TLTFFI*FTVRGFKLSPVRFTRLLAISEGTGSSSEPLGSLFFIFKPISLLHTFFSLLKLS 251
T ++ + T R F LSP T L + +++ + S+ F+++ ++ H F LK
Sbjct: 79 TASWLLFITERPFGLSPDSLTLFLVLYAVLYAATICMLSVQFVYRYCAIFHQFG--LKYF 136
Query: 250 ASWRNFLHKVSCS 212
WR V CS
Sbjct: 137 EGWRMLSIAVYCS 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,267,466
Number of Sequences: 27780
Number of extensions: 341998
Number of successful extensions: 1206
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -