Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_H07
(763 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC823.04 |||rRNA processing protein, DUF947|Schizosaccharomyce... 79 5e-16
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 34 0.025
SPAC22A12.11 |dak1||dihydroxyacetone kinase Dak1|Schizosaccharom... 29 0.96
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 28 1.3
SPAC27E2.06c |||methionine-tRNA ligase, mitochondrial|Schizosacc... 28 1.3
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 28 1.7
SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyc... 28 1.7
SPAC323.08 |||ribonuclease MRP complex subunit |Schizosaccharomy... 27 2.9
SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces p... 27 3.9
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 26 5.1
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 26 6.7
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 25 8.9
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 8.9
SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual 25 8.9
>SPAC823.04 |||rRNA processing protein, DUF947|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 189
Score = 79.4 bits (187), Expect = 5e-16
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Frame = +1
Query: 307 KNRPREISSKKPVPVV-QVAHVKRKEVRDPRFDPLCGEFDKKQFSQNYGFLSELRMKDIK 483
K+ P+E+SSKKPV +V +K RDPRFD L G K + +NYGFL+E R+ +I+
Sbjct: 14 KHAPQELSSKKPVSRFREVISEPKKFTRDPRFDSLSGNLSKDKVKKNYGFLNEYRVSEIQ 73
Query: 484 AARQELRETTDPEKQIKXXXXXXXXNDQHKACKRNKLDREVAQKNRDNIEKQFREGKQPH 663
R EL+ D E+ + + + V + R +++ +EGK+P
Sbjct: 74 QLRDELKICKDQERAESIRQTLKSLLSKMERHLEEERAERVMHEFRAQEKERVKEGKKPF 133
Query: 664 FKNKSELRVEALVNQYESLKKEGTXRVQRHLKR 762
+ ++E + +++Y+S+ EGT + +++++
Sbjct: 134 YLKRNEQKKLIQMDKYKSM--EGTKALDKYIEK 164
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 33.9 bits (74), Expect = 0.025
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1
Query: 139 EIEDNERTSIRSELASLSFEELQQLKEKIGAKVYKEA 249
E+++ ER S + ELA L E LQ L+EK+GA V+ A
Sbjct: 2396 ELQEAERKS-QQELADLVTESLQVLQEKVGATVFARA 2431
>SPAC22A12.11 |dak1||dihydroxyacetone kinase
Dak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 28.7 bits (61), Expect = 0.96
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Frame = +1
Query: 10 DEILVEKSKINNPYYKKSKPC----DLIQYLLLKMSCSEDNEDSHVDEIEDNERTSIRSE 177
DE+ + N P K+ P DLI +L +M D + ++V D+E + +
Sbjct: 212 DEMELGMGIHNEPGCKRISPIPSIDDLIAQMLKQMLDQSDKDRAYVKIEGDDEVVLLMNN 271
Query: 178 LASLSFEELQQLKEKIGAKVYKE 246
L LS E + K+ + KE
Sbjct: 272 LGGLSMLEFSAISHKVKEALAKE 294
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 28.3 bits (60), Expect = 1.3
Identities = 24/125 (19%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Frame = +1
Query: 136 DEIEDNERTSIRSELASLSFEELQQLKE--KIGAKVYKEALFGTKEKVNVPPKVFKRENK 309
+ I E ++ E E+ ++L+E KI AK KE KE++ + + +R +
Sbjct: 88 ERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERIRLQEQ--QRRKE 145
Query: 310 NRPREISSKKPVPVVQVAHVKRKEVRDPRFDPLCGEFDKKQFSQNYGFLSELRMKDIKAA 489
R +++ K+ ++ + KE + + + + +K+ + N F+++ + ++
Sbjct: 146 ERDQKLREKEEAQRLRQEQILNKERQQLKLNNFFTKGVEKRIAPNENFVAD-KTDELNEF 204
Query: 490 RQELR 504
+E R
Sbjct: 205 EKEFR 209
>SPAC27E2.06c |||methionine-tRNA ligase,
mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 73 DLIQYLLLKMSCSEDNEDSHVDEIEDNERTSIRSELASLSFEELQQLKEKIGAKVYKE 246
D I+Y LLK + + ++E+E +E +R L L LQ K I ++ K+
Sbjct: 347 DTIRYYLLKRGRLTSDSNFDIEELEKDEEHDLRRSLGVL-LSRLQSKKLFISNEIQKQ 403
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 103 SCSEDNEDSHVD-EIEDNERTSIRSELASLSFEELQQLKEK 222
S EDN D E +D+ + S L FEEL+ L+EK
Sbjct: 38 SVDEDNTSVFEDVEAQDSRQKRFSSTLEGNRFEELRSLREK 78
>SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 852
Score = 27.9 bits (59), Expect = 1.7
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = +1
Query: 259 TKEKVNVPPKVFKRENKNRPREISSKKPVPVVQVAHVKRKEVRDPRFDPLCGEFDKKQFS 438
+K K NVP K+FK+ K IS K+ ++ K+ V + + G++D S
Sbjct: 23 SKNKENVPGKLFKK-FKCPSLVISEKRK----ELPLRKKPRVNYSEYGSVDGKYDSAYVS 77
Query: 439 QNYGFLSELRMKDIKAARQELRE-TTDPEKQIKXXXXXXXXNDQHKAC 579
+N L+ ++ + E R+ +T +KQ D K C
Sbjct: 78 ENVSGLATIKEANRLILNHERRDPSTVIKKQFSVPKPIKGHEDISKLC 125
>SPAC323.08 |||ribonuclease MRP complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 211
Score = 27.1 bits (57), Expect = 2.9
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +1
Query: 136 DEIEDNERTSIRSELASLSFEELQQLKEKIGAKVYKEALFGTKEKVNVPPKVFKRENKNR 315
DE+ E S+ AS S+E+L K E+LF + + V KR++KN
Sbjct: 130 DELLATEPISLSINPASTSYEKLTVSSPNSFLKNQDESLFLSSSPITVSQGT-KRKSKNS 188
Query: 316 PREISSKK 339
+ KK
Sbjct: 189 NSTVKKKK 196
>SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 612
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 4 PADEILVEKSKINNPYYKKSKPCDLIQYL 90
PADEI KS I Y +K C +Q+L
Sbjct: 92 PADEIPSSKSCILTILYSTTKDCTALQFL 120
>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 459
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 130 HVDEIEDNERTSIRSELASLSFEELQ 207
HV++ ED RT ++S+ A +S E+Q
Sbjct: 93 HVEDKEDLNRTVVKSQEAIVSIPEIQ 118
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/65 (20%), Positives = 35/65 (53%)
Frame = +1
Query: 25 EKSKINNPYYKKSKPCDLIQYLLLKMSCSEDNEDSHVDEIEDNERTSIRSELASLSFEEL 204
E ++ K S+ CDL + LL++S + ++ ++E+E +E + +++ ++ +
Sbjct: 874 ELEQLEKDINKSSEDCDLQKKKLLEVSSKQGSQAPFLNELE-SEYEKLEADIQEMAQKSR 932
Query: 205 QQLKE 219
++ E
Sbjct: 933 TEILE 937
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 595 DREVAQKNRDNIEKQFREGKQPHFKNKSELRVEALVNQYESLKKEGT 735
+RE N DN + F + FKN+S L + + + KEG+
Sbjct: 1492 ERENVSSNEDNSPEAFEDIFGILFKNESGLEEQQNLEPSSQMDKEGS 1538
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.4 bits (53), Expect = 8.9
Identities = 37/219 (16%), Positives = 87/219 (39%), Gaps = 3/219 (1%)
Frame = +1
Query: 10 DEILVEKSKINNPYYKKSKPCDLIQYLLLKMSCSEDNEDSHVDEIEDNERTSIRS-ELAS 186
+E K ++++ K S+ D++ ++ N + +D E + E
Sbjct: 1446 EEFNSTKEELSSTQRKLSEIMDILNTTKEELEKVRQNSNKSEGTSKDTEIPNEEEMERKK 1505
Query: 187 LSFEELQQLKEKIGAKVYKEALFGTKEKV-NVPPKVFKRENKNRPREISSKKPVPVVQVA 363
+ +E+ +L+ +I ++ K L + +V K + + S+ +
Sbjct: 1506 VMQQEVLRLRSRIAKELQKNELLRKQNQVLQDQVKALQETVVSSEEAESASVHADTKDLE 1565
Query: 364 HVKR-KEVRDPRFDPLCGEFDKKQFSQNYGFLSELRMKDIKAARQELRETTDPEKQIKXX 540
++K+ +E+ F + E FS + + K+ + R+ L++ D E+Q+
Sbjct: 1566 NLKKTEEMLSVTFQVIFNE-SISDFSTSTADFTTFVQKEWEKRREILQK--DVEEQVAQS 1622
Query: 541 XXXXXXNDQHKACKRNKLDREVAQKNRDNIEKQFREGKQ 657
N + + RNKL + +KN + + + K+
Sbjct: 1623 HQKQLDNIRKELEMRNKLKLSMLEKNLARVRAELEQSKK 1661
>SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1097
Score = 25.4 bits (53), Expect = 8.9
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +1
Query: 112 EDNEDSHVDEIEDNERTSIRSELASLSFEELQQLKEKIGAKVYKEALFGTKEKVNVPPKV 291
E DSHVD IED + + + + E L+ L + ++ L +++V K
Sbjct: 21 ETEYDSHVDSIEDIHSLASKRKKLNEKKENLEDL-TLLKTSAFELKLNELIREISVRGKY 79
Query: 292 FKRENK--NRPREISSKKPV 345
F+ N + +++ K PV
Sbjct: 80 FRHANTFVEKIKDLIFKTPV 99
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.130 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,715,313
Number of Sequences: 5004
Number of extensions: 51315
Number of successful extensions: 168
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -