Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_H07
(763 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0011 + 20217882-20217989,20218085-20218272,20218355-202184... 65 7e-11
11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952... 33 0.33
11_03_0066 + 9529969-9530166,9530271-9530450,9530559-9531287,953... 31 1.3
08_01_1029 - 10419090-10419476,10419721-10419822,10420367-104204... 30 1.7
01_07_0366 + 43088835-43089099,43089311-43089876 29 3.1
12_02_0362 + 17998110-17998345,17998877-17998958,18000309-180003... 29 4.0
07_03_1726 - 29062654-29064414 29 4.0
01_06_1656 + 38946922-38947542,38947640-38947739,38948045-389481... 29 4.0
02_02_0175 - 7465951-7466019,7466410-7466492,7467126-7467289,746... 28 7.1
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605... 28 9.3
02_02_0186 + 7594197-7594281,7594409-7594513,7595062-7595238,759... 28 9.3
01_06_1802 + 39978634-39978880,39979016-39979431 28 9.3
>09_06_0011 +
20217882-20217989,20218085-20218272,20218355-20218421,
20218464-20218538,20219100-20219152,20219661-20219715,
20219812-20219886,20220495-20220612,20220720-20220766,
20220853-20220954
Length = 295
Score = 64.9 bits (151), Expect = 7e-11
Identities = 33/118 (27%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Frame = +1
Query: 382 VRDPRFDPLCGEFDKKQFSQNYGFLSELRMKDIKAARQE-LRETTDPEKQIKXXXXXXXX 558
VRDPRF+P+ G DK+ F + Y FL + + K Q+ ++++ DP +
Sbjct: 148 VRDPRFEPVYGPVDKEGFRKRYNFLFDDELPAEKEKLQKSIKKSKDPNAIEEMKSRITWI 207
Query: 559 NDQHKACKRNKLDREVAQKNRDNIEKQFREGKQPHFKNKSELRVEALVNQYESLKKEG 732
+ Q ++ + ++ E+ +++ + + GK+P++ KSE+R L+N+Y LK+ G
Sbjct: 208 DKQLRSHPKKNVESEILREHIKKEREATKTGKRPYYLKKSEIRERKLMNKYNELKEAG 265
>11_03_0065 -
9522478-9525335,9525513-9526028,9526432-9527247,
9527440-9527767
Length = 1505
Score = 32.7 bits (71), Expect = 0.33
Identities = 45/216 (20%), Positives = 93/216 (43%), Gaps = 12/216 (5%)
Frame = +1
Query: 52 YKKSKPCDLIQYLLLKMSCSEDNEDSHVD-EIEDNERTSIRSELASLSFE-ELQQLKEKI 225
Y+ SK I++ K S+D + D +I DN R SI + L E E++ ++K+
Sbjct: 201 YQDSKGNVSIRFTNYKTRASDDLDAESSDRDIIDNRRHSISELMEKLDHESEIKYYEDKL 260
Query: 226 G--AKVYKEALFGTKEKVNVPPKVFKRE-----NKNRPREISSKKP-VPVVQVAHVKRKE 381
A Y ++ K+ F RE + + + ++ + P +++ +K +E
Sbjct: 261 RDIADEYNNSMKSEWPKIRDKKLYFYRELSRIKKQKKEKSLAIETPRTQEIKIEQIKSEE 320
Query: 382 VRDP--RFDPLCGEFDKKQFSQNYGFLSELRMKDIKAARQELRETTDPEKQIKXXXXXXX 555
R+ + D + E ++Q+ N L E ++ +E+ + + +
Sbjct: 321 PREEIQKLDKVLSE--EEQWEVNEKLLLESYEEENNLI-EEIENIEEEDNAEQYNDFIDS 377
Query: 556 XNDQHKACKRNKLDREVAQKNRDNIEKQFREGKQPH 663
+++ ++ K L + +KN +N E+ R G PH
Sbjct: 378 LDEEGESAK--VLWEQWVEKNPNNYEELKRAGSNPH 411
>11_03_0066 +
9529969-9530166,9530271-9530450,9530559-9531287,
9531554-9531706,9531803-9532238,9532322-9532501,
9532643-9532889,9533090-9533123,9533385-9533489,
9533833-9533967,9534220-9534399,9534504-9534626
Length = 899
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 112 EDNEDSHVDEIEDNERTSIRSELASLSFEELQQLKEKIGAKVYKEALFGTKEKVNVPPKV 291
E++ED + D++ED E + + + E ++K K+ EA+ G+K+KV K+
Sbjct: 95 EEDEDEYEDDVED-EDEEVEEDDDNDFMEPALKVKRKVPQNRKTEAMQGSKKKVASKQKL 153
Query: 292 FK 297
K
Sbjct: 154 TK 155
>08_01_1029 -
10419090-10419476,10419721-10419822,10420367-10420459,
10420542-10420754,10421625-10421654
Length = 274
Score = 30.3 bits (65), Expect = 1.7
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 14/167 (8%)
Frame = +1
Query: 199 ELQQLKEKIGAKVYKEALFGTKEKV-NVPPK---VFKRENKNRPREISSKKPVPVVQV-A 363
EL Q + G++ Y + + K +VPP +FK + + + + Q+ A
Sbjct: 92 ELVQYHQMTGSRSYVAQCYVMQTKFKDVPPTAIDIFKDTHCSSKSGFNENAKDAIAQMEA 151
Query: 364 HVKR--KEVRDPR--FDPLCGEFDKKQFSQNYGFLSELRMKDIKAAR-----QELRETTD 516
+V + +E +DP+ + + K F +N G S K+ KAA +EL
Sbjct: 152 YVAQPTEEGKDPKTPVEAVAHVLPKSTFLRNVGMQSTEMKKNAKAAAMNDHVRELESELH 211
Query: 517 PEKQIKXXXXXXXXNDQHKACKRNKLDREVAQKNRDNIEKQFREGKQ 657
EK + D HK + K EVA+KN + EK +G +
Sbjct: 212 AEK-MGSARMQLQIADLHKQLEDQK---EVARKNEEETEKLRHQGSE 254
>01_07_0366 + 43088835-43089099,43089311-43089876
Length = 276
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 79 IQYLLLKMSCSEDNEDSHVDEIEDNERTSIRSELASLSFEELQQ 210
++ L LK + ++D H D +D++R S S +S S LQQ
Sbjct: 156 LRKLKLKQQKQQQSDDHHNDNDDDDDRNSSSSSSSSNSNSNLQQ 199
>12_02_0362 +
17998110-17998345,17998877-17998958,18000309-18000392,
18000600-18000734,18001395-18001570,18001654-18001805,
18003730-18004575,18004961-18005301
Length = 683
Score = 29.1 bits (62), Expect = 4.0
Identities = 42/230 (18%), Positives = 88/230 (38%), Gaps = 15/230 (6%)
Frame = +1
Query: 91 LLKMSCSEDNEDSHVDEIED------NERTSIRSELASLSFEELQQLKE-KIGAKVYKEA 249
L + +C+ + SH +E E N+R S++SE L + Q + GA +
Sbjct: 297 LYEQNCAAQAQPSHGNEAEGSSASVPNQRVSVKSEETPLPHQSKQSSSQHSTGAPSHHGV 356
Query: 250 LFGTKEKVNVPPKVFKREN------KNRPREISSKKPVPVVQVAHVKRKEVRDPRFDPLC 411
EK V K+ + +N K R + S+ H ++ + + + P
Sbjct: 357 EHSNLEKQTVDQKMLQNDNGDHGSNKTRSNQSGSRVDFGANDGLHHDKQSMTENKNLPSH 416
Query: 412 GEFDK-KQFSQNYGFLSELRMKDI-KAARQELRETTDPEKQIKXXXXXXXXNDQHKACKR 585
G + + ++N + + + K + +++ + ++++K
Sbjct: 417 GNSSEIRDVNRNGNDGTNVTSLMVNKIDKDKVKAQMEKQRKLKGDVARKVEVIDDDDDLE 476
Query: 586 NKLDREVAQKNRDNIEKQFREGKQPHFKNKSELRVEALVNQYESLKKEGT 735
+L+ ++ DN KQ R+ PH ++ + R V L K+ T
Sbjct: 477 RQLEHDIELAVEDNKIKQERKQSSPHVMHRGDHRNADQVTGNGHLGKQNT 526
>07_03_1726 - 29062654-29064414
Length = 586
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 112 EDNEDSHVDEIEDNERTSIRSELASLSFEELQQ 210
+D++D VD+IE+ ER R + +ELQQ
Sbjct: 63 DDDDDDDVDDIEELERRMWRDRVRHKRLKELQQ 95
>01_06_1656 +
38946922-38947542,38947640-38947739,38948045-38948189,
38948868-38948991,38949443-38949960,38950111-38950458,
38950557-38950638,38951309-38951707,38951790-38951927,
38952063-38952108,38952200-38952369
Length = 896
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/97 (20%), Positives = 43/97 (44%)
Frame = +1
Query: 460 ELRMKDIKAARQELRETTDPEKQIKXXXXXXXXNDQHKACKRNKLDREVAQKNRDNIEKQ 639
EL+ K+ + AR ++ E+ ++ + K K+ + E AQK + EK+
Sbjct: 344 ELKQKEKEEARMRKQQKKQQEEALREQKRREKEEAEMK--KQQRKQEEEAQKEQKRREKE 401
Query: 640 FREGKQPHFKNKSELRVEALVNQYESLKKEGTXRVQR 750
E ++ K + E E + E+++ + +Q+
Sbjct: 402 EAETRKQQKKQQEEAEKEQKRREKEAVQLKKQLAIQK 438
>02_02_0175 -
7465951-7466019,7466410-7466492,7467126-7467289,
7467385-7467640,7467830-7467935,7467962-7468007,
7468316-7468388,7468508-7468577
Length = 288
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +1
Query: 565 QHKACKRNKLDREVAQKNRDNIEKQFREGKQPHFKNKSELRVEALVNQYESLKKEGTXRV 744
Q A K +++EV +RD E Q + ++ K K + + L ++YES K+
Sbjct: 152 QKMAKKCQLMEQEVENLSRDKQELQEKFAEKSRQKRKLDEMYDQLRSEYESAKRSAIQPA 211
Query: 745 QRHLKR 762
+ R
Sbjct: 212 NNYFPR 217
>04_04_1400 -
33259716-33260069,33260172-33260219,33260471-33260596,
33260850-33260900,33260963-33261055,33261217-33261272,
33261465-33261522,33262306-33262365,33262513-33262623,
33263368-33263949,33264026-33264097
Length = 536
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = +1
Query: 103 SCSEDNEDSHVDEIEDNERTSIRSE-LASLSFEELQQLKEKI----GAKVYKEALFGTKE 267
S S+D+EDS + + ER R+E LA+++ + + +E + G K E L +E
Sbjct: 153 SGSDDSEDSEEERRREEERRRRRAERLAAMAARAIAEREEAVAKLEGEKASLEKLLAERE 212
Query: 268 K 270
K
Sbjct: 213 K 213
>02_02_0186 +
7594197-7594281,7594409-7594513,7595062-7595238,
7595716-7595886,7596198-7596289,7596302-7596407,
7597516-7597601,7597861-7598501,7599065-7599107
Length = 501
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +1
Query: 253 FGTKEKVNVPPKVFKRENKNRPREISSKKPV----PVVQVAHVKRKEVRDPRFDP 405
+G+ E V KV K ++R RE S + P + A VK + DP++DP
Sbjct: 420 YGSSETPQVSSKVPKDRLRHRHREKSGEAVYGTSHPEPKPAEVKPADYSDPKYDP 474
>01_06_1802 + 39978634-39978880,39979016-39979431
Length = 220
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 256 GTKE-KVNVPPKVFKRENKNRPREISSKKPVPVVQVA 363
GT+ +++ P + R NRPR ++ + PVVQ A
Sbjct: 60 GTRSLRMHASPPDYGRRRTNRPRRVARTRSPPVVQEA 96
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.130 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,059,754
Number of Sequences: 37544
Number of extensions: 277170
Number of successful extensions: 764
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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