Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_H06
         (498 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0256 - 13564070-13564456,13564543-13565299,13565734-135665...    28   3.6  
08_01_0451 + 3979323-3979566,3979649-3980012,3980112-3980330,398...    27   6.3  
06_02_0013 - 10581449-10585105                                         27   8.4  

>04_03_0256 -
           13564070-13564456,13564543-13565299,13565734-13566535,
           13566884-13566917
          Length = 659

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -3

Query: 301 PKSADVAKFFLLFQKENFAYKTILLHHKAALSTFYFIIALCLII 170
           P+SA  + FF  + K+    KTIL+   AA+     ++ + + +
Sbjct: 299 PQSATYSLFFCPYTKQKLQTKTILVSILAAIGALILVVVVAIYV 342


>08_01_0451 +
           3979323-3979566,3979649-3980012,3980112-3980330,
           3980713-3980872,3981680-3981817,3982161-3982448
          Length = 470

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = -3

Query: 265 FQKENFAYKTILLHHKAALSTF--YFIIALCLIISPADNKHVFIIQCCMFSKGTSILRFY 92
           ++ E++  KT+  H + + +T   + I     +       HV  +QC MF  GT++    
Sbjct: 343 WRDEHYIPKTVDEHLEVSRATVGAFEIACASFVREQKGEHHVSTVQCYMFQHGTTMHDAC 402

Query: 91  ITIKPIL 71
           + IK ++
Sbjct: 403 VKIKELI 409


>06_02_0013 - 10581449-10585105
          Length = 1218

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 40  CNAVCFPSRHIISVLLLCKTVILMCLW 120
           CNA  F +  ++ +LLL K+V    LW
Sbjct: 134 CNATAFAASLVLIILLLSKSVTRQNLW 160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,150,387
Number of Sequences: 37544
Number of extensions: 200603
Number of successful extensions: 430
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)