Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_H05
         (812 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   6.4  
AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    24   6.4  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   8.5  

>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = -2

Query: 346 IARSAPIARAVLRVSCACDG---PQETAMTSLANFFSFIRTASSTAI 215
           I R   +AR +  V   CD    P + A TSLA    +++ ASS  +
Sbjct: 318 IERIFELARTLQLVVLDCDTINHPSQLAKTSLAPTIVYLKIASSKVL 364


>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +1

Query: 316 LLLRWVQIELFMLKWLGLNMTHYSPFMLQKS*QN 417
           L  +W+++EL +++   L   HY P  L+ + Q+
Sbjct: 20  LFAKWLKLELNLIELDVLKRDHYKPEFLKLNPQH 53


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -2

Query: 517 QSNKAAVICA-VWLESSSMACLPTITKS 437
           Q++   V C+ +W   SSM C P  T S
Sbjct: 58  QASTCPVPCSSIWSRPSSMRCAPARTAS 85


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 840,438
Number of Sequences: 2352
Number of extensions: 16016
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)