Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_H02
(862 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 24 1.6
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 23 2.7
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 23 2.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 3.6
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 4.8
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 4.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 6.3
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 8.4
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 8.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 8.4
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 8.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 8.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 8.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 8.4
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 8.4
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 8.4
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 8.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 8.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 8.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 8.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 8.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 8.4
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 8.4
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 24.2 bits (50), Expect = 1.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 545 LYYRSPFHVVTSTFCGACRESELASRIGQM 634
L Y HV T+ + ES L S+IGQ+
Sbjct: 327 LRYLQELHVDAPTWISSVTESVLKSKIGQV 356
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 301 NTSAHSTDGDSEFSRRSNESDKEVSSTQGKHN 396
N + HS+ D++ + + N+ S + +HN
Sbjct: 430 NQARHSSKSDNQNNNQHNDQAHHSSKSNNRHN 461
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 761 KNTQKHNSLAVS*TASFNRYNNN 693
+N +HN A + S NR+NNN
Sbjct: 441 QNNNQHNDQAHHSSKSNNRHNNN 463
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 23.4 bits (48), Expect = 2.7
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -1
Query: 385 LECLKLLCLTHWTF 344
++CL ++CL W+F
Sbjct: 385 IQCLTVVCLAFWSF 398
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 719 ASFNRYNNNYHIIWQSL 669
+++N YNNNY+ ++ L
Sbjct: 92 SNYNNYNNNYNTNYKKL 108
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 719 ASFNRYNNNYHIIWQSL 669
+++N YNNNY+ ++ L
Sbjct: 92 SNYNNYNNNYNTNYKKL 108
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 719 ASFNRYNNNYHIIWQSL 669
+++N YNNNY+ ++ L
Sbjct: 92 SNYNNYNNNYNTNYKKL 108
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 719 ASFNRYNNNYHIIWQSL 669
+++N YNNNY+ ++ L
Sbjct: 92 SNYNNYNNNYNTNYKKL 108
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 719 ASFNRYNNNYHIIWQSL 669
+++N YNNNY+ ++ L
Sbjct: 92 SNYNNYNNNYNTNYKKL 108
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 719 ASFNRYNNNYHIIWQSL 669
+++N YNNNY+ ++ L
Sbjct: 92 SNYNNYNNNYNTNYKKL 108
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 719 ASFNRYNNNYHIIWQSL 669
+++N YNNNY+ ++ L
Sbjct: 92 SNYNNYNNNYNTNYKKL 108
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 716 SFNRYNNNYHIIWQSL 669
++N YNNNY+ ++ L
Sbjct: 97 NYNNYNNNYNTNYKKL 112
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 285 RCPFLEHLG 311
+CPF EHLG
Sbjct: 197 KCPFTEHLG 205
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 643 LVLHLPYPRSQLTFTACSTES 581
L++H P Q+T TA +T S
Sbjct: 1361 LIVHAPPHSPQITLTATTTNS 1381
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -3
Query: 719 ASFNRYNNNYH 687
+++N YNNNY+
Sbjct: 92 SNYNNYNNNYN 102
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -3
Query: 719 ASFNRYNNNYH 687
+++N YNNNY+
Sbjct: 92 SNYNNYNNNYN 102
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -3
Query: 719 ASFNRYNNNYH 687
+++N YNNNY+
Sbjct: 92 SNYNNYNNNYN 102
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -3
Query: 716 SFNRYNNNYHIIWQSL 669
++N YNNNY ++ ++
Sbjct: 90 NYNNYNNNYKPLYYNI 105
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -3
Query: 716 SFNRYNNNYHIIWQSL 669
++N YNNNY ++ ++
Sbjct: 90 NYNNYNNNYKPLYYNI 105
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -3
Query: 716 SFNRYNNNYHIIWQSL 669
++N YNNNY ++ ++
Sbjct: 90 NYNNYNNNYKPLYYNI 105
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -3
Query: 716 SFNRYNNNYHIIWQSL 669
++N YNNNY ++ ++
Sbjct: 90 NYNNYNNNYKPLYYNI 105
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.8 bits (44), Expect = 8.4
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 107 VISECTSAQKYQKLHSFLDWTALQIRMATARGFFFDDETGELVTYGVNEET 259
VI C+S + Y L L A I + A FF DD + + + +T
Sbjct: 80 VIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDT 130
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 8.4
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 107 VISECTSAQKYQKLHSFLDWTALQIRMATARGFFFDDETGELVTYGVNEET 259
VI C+S + Y L L A I + A FF DD + + + +T
Sbjct: 80 VIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDT 130
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -3
Query: 716 SFNRYNNNYHIIWQSL 669
++N YNNNY ++ ++
Sbjct: 323 NYNNYNNNYKPLYYNI 338
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -3
Query: 716 SFNRYNNNYHIIWQSL 669
++N YNNNY ++ ++
Sbjct: 323 NYNNYNNNYKPLYYNI 338
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -3
Query: 716 SFNRYNNNYHIIWQSL 669
++N YNNNY ++ ++
Sbjct: 323 NYNNYNNNYKPLYYNI 338
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -3
Query: 716 SFNRYNNNYHIIWQSL 669
++N YNNNY ++ ++
Sbjct: 323 NYNNYNNNYKPLYYNI 338
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -3
Query: 716 SFNRYNNNYHIIWQSL 669
++N YNNNY ++ ++
Sbjct: 312 NYNNYNNNYKPLYYNI 327
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -3
Query: 719 ASFNRYNNNYH 687
+++N YNNNY+
Sbjct: 325 SNYNNYNNNYN 335
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 716 SFNRYNNNYHIIWQSL 669
++N YNNNY+ ++ L
Sbjct: 336 NYNNYNNNYNNNYKKL 351
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 8.4
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 107 VISECTSAQKYQKLHSFLDWTALQIRMATARGFFFDDETGELVTYGVNEET 259
VI C+S + Y L L A I + A FF DD + + + +T
Sbjct: 80 VIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDT 130
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,318
Number of Sequences: 438
Number of extensions: 4871
Number of successful extensions: 36
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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