Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_G19
(540 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480 34 0.083
05_06_0051 - 25190803-25191216,25191301-25191891,25193248-251933... 30 1.0
02_01_0667 - 4958924-4959523 29 2.4
08_02_1012 + 23550314-23551504 29 3.1
07_03_0493 + 18747427-18748356,18748594-18748697,18749586-187497... 29 3.1
11_06_0610 - 25449085-25453284 28 4.1
12_02_1086 - 25946501-25946632,25947140-25947385,25947510-25948193 28 5.5
10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442... 28 5.5
08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748... 28 5.5
02_05_1206 + 34941293-34941562,34942052-34942153,34942249-349425... 28 5.5
01_05_0026 - 17315805-17315831,17315930-17316010,17316809-173168... 28 5.5
11_01_0361 + 2772193-2772334,2773457-2773587,2773872-2773985,277... 27 7.2
10_08_0943 + 21728294-21728675,21728767-21728840,21729469-217304... 27 7.2
06_03_1259 - 28800954-28802468 27 7.2
03_05_0732 - 27232299-27232535,27232717-27232746,27233094-272331... 27 7.2
02_01_0035 - 220036-221419,222050-222801 27 7.2
07_03_1116 - 24084162-24084201,24084481-24084570,24084640-240852... 27 9.6
06_03_1258 + 28796643-28798169 27 9.6
05_01_0206 + 1487034-1489430 27 9.6
05_01_0063 + 446761-447681 27 9.6
04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859 27 9.6
03_02_0149 + 5933134-5933207,5935039-5935267,5935370-5935468,593... 27 9.6
02_01_0277 + 1848286-1848561 27 9.6
01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857... 27 9.6
>01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480
Length = 623
Score = 33.9 bits (74), Expect = 0.083
Identities = 14/75 (18%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -3
Query: 298 FLGNINWRCNFASSVSCVIVVVGM-LVRGSVWDFWRRLGSRRNQWLKTKGICMLPTQGGS 122
F + W+ ++C+ +++G+ L+RG + WR + + W C + +
Sbjct: 392 FQSSTQWQSAIYKEMNCLELLIGLELLRGKIHSCWREMAQLKIPWTPPLNACAVTLLAHA 451
Query: 121 S*KPAMQVKCRVSGT 77
+ + KC++ G+
Sbjct: 452 --RESFSCKCKIKGS 464
>05_06_0051 -
25190803-25191216,25191301-25191891,25193248-25193317,
25193392-25193443,25195368-25195440,25195557-25195646
Length = 429
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 179 PRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPP 280
P+TQPPP P P+ H Y+Y + E P
Sbjct: 96 PQTQPPPPPPPPPTSAAHHAYHYQYQYQYEQPKP 129
>02_01_0667 - 4958924-4959523
Length = 199
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 158 RFEPLVSPRTQPPPEIPDG 214
R P++ PR PPP IPDG
Sbjct: 117 RPRPVLPPRPPPPPPIPDG 135
>08_02_1012 + 23550314-23551504
Length = 396
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 6/61 (9%)
Frame = +2
Query: 197 PEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSD------KGAPKQAANVRPT 358
P P PS + R R PP+ E+ SA S +G P +AA +PT
Sbjct: 150 PRPPPAPSPQKQQPQPQPRSPRPASPPPVPAAPEVASAVSTPPARPKRGRPPRAAKPQPT 209
Query: 359 P 361
P
Sbjct: 210 P 210
>07_03_0493 +
18747427-18748356,18748594-18748697,18749586-18749795,
18749992-18750597,18750819-18751095,18751163-18751310,
18751957-18752044,18752167-18752284
Length = 826
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 161 FEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDA 259
F LV P P P PD H+H H++++ DA
Sbjct: 32 FNILVPPPQSPRPRCPD---HQHHHHHHHHHDA 61
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = +2
Query: 167 PLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPKQAAN 346
P ++P PPPE PSH + +E PP T + S ++ P A
Sbjct: 883 PTLTPEISPPPEGKSPPSHTPES----SSPPSKESEPPPTPTPKSSPPSHEEYVPPSPAK 938
Query: 347 VRPTP 361
P P
Sbjct: 939 STPPP 943
>12_02_1086 - 25946501-25946632,25947140-25947385,25947510-25948193
Length = 353
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -1
Query: 225 LCEGPSGI-SGGGWVLGETNGSKRRAFV 145
LCEG S + GG+ + ETNG+K+ F+
Sbjct: 293 LCEGLSSVLKPGGFFVFETNGNKQSEFL 320
>10_08_0106 + 14842748-14843085,14843122-14843250,14844145-14844211,
14847177-14847324,14847998-14848097,14848306-14848384,
14848527-14848687,14848829-14848908,14849319-14849475,
14849575-14849723,14849909-14850076,14850426-14850719,
14851002-14851046,14851213-14851462,14851707-14851835,
14852799-14853039,14853977-14854642
Length = 1066
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 137 RKHTNALRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDAR 262
+K +++ R++ L P PP + H HA N DAR
Sbjct: 880 KKRSSSDRYDDLPLPPPPPPASRHEAAEHAHAKNTAAAADAR 921
>08_01_0774 +
7482311-7482919,7484012-7484077,7484211-7484384,
7484473-7484603,7484726-7484802,7484981-7485064,
7487885-7488066,7488189-7488266,7489813-7489945,
7491610-7491670,7491861-7491942,7492143-7492271,
7492510-7492653,7493102-7493204,7493382-7493513,
7494127-7494485,7495149-7495229,7495384-7495450,
7495636-7495706,7496087-7496178,7496365-7496458,
7497692-7497789,7498206-7498341,7498599-7498618,
7498781-7498876,7498973-7499060,7499171-7499288,
7499738-7499759,7500203-7500326,7500625-7500702,
7500837-7500955,7501816-7501869,7502260-7502362,
7503133-7503261,7503345-7503453,7503788-7503819
Length = 1424
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 179 PRTQPPPEIPDGPSHKHAHNYY-YTRDARREV---APPIDVTKELLSASSDKG 325
P +Q PP PD S HA N Y++ + V I VT L ASS+KG
Sbjct: 366 PESQAPPNSPDSYSDLHALNKLPYSKIDSKAVGITTGVIFVTYSSLIASSEKG 418
>02_05_1206 +
34941293-34941562,34942052-34942153,34942249-34942521,
34942863-34942913
Length = 231
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 180 GETNGSKRRAFVCFLHKEEVPESL 109
GET S+ FVC+ KEE+ E+L
Sbjct: 186 GETGRSRGYGFVCYSTKEEMDEAL 209
>01_05_0026 -
17315805-17315831,17315930-17316010,17316809-17316871,
17317542-17317620,17317711-17317928,17319688-17319879
Length = 219
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 143 HTNALRFEPLVSPRTQPPPEI-PDGPSHKHA 232
H NAL++ P QPPP+ P P H HA
Sbjct: 26 HLNALQYNHQQQP--QPPPQATPPPPQHHHA 54
>11_01_0361 +
2772193-2772334,2773457-2773587,2773872-2773985,
2774303-2774459,2774577-2775000,2775238-2776030,
2776182-2776241,2776952-2777593
Length = 820
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +2
Query: 194 PPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTK 295
PP+I + + H +++R RE P+D+ K
Sbjct: 474 PPQIDEHKQPEENHQLHHSRQILRESGEPVDLAK 507
>10_08_0943 +
21728294-21728675,21728767-21728840,21729469-21730443,
21730617-21730683,21730765-21730827,21731001-21731064,
21731162-21731255,21731352-21731435,21731523-21731612,
21731708-21731735,21732117-21732596,21732679-21732740,
21732820-21732929,21733014-21733101,21733228-21733557,
21733782-21733904
Length = 1037
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 225 LCEGPSGISGGGWVLGETNGSKRRAFVC 142
LC G S I+G G + + NG RR C
Sbjct: 784 LCSGGSAIAGSGMLNSKGNGKHRREGPC 811
>06_03_1259 - 28800954-28802468
Length = 504
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 132 CVGSIQMPFVLSHWFRLEPSLLQKSQTDPRTSM 230
CVG M F +H RL+P+LL+ + D + +
Sbjct: 372 CVGERLMVFTTNHPERLDPALLRPGRMDRKIEL 404
>03_05_0732 -
27232299-27232535,27232717-27232746,27233094-27233155,
27233975-27234005,27234618-27234713,27234881-27234969,
27235687-27236263
Length = 373
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +2
Query: 77 SSTNATFHLHCRLSGTSSLCRKHTNA--LRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYT 250
S+ ++H H RL N+ +R L+ + PPP P P +H H+ T
Sbjct: 16 SALPPSYHHHRRLPPPQQQHPDPLNSVWIRRLHLLPHQPPPPPPPPPLPQPQHHHDAVST 75
Query: 251 RDARREVAPP 280
++R PP
Sbjct: 76 DESRTPPPPP 85
>02_01_0035 - 220036-221419,222050-222801
Length = 711
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +2
Query: 188 QPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAP 331
QPPP P H H H+ ++ E A P SA+S AP
Sbjct: 123 QPPPPARWAPQHHHHHHPHHHLGLDVEAAVPESSGAGAGSAASGAAAP 170
>07_03_1116 -
24084162-24084201,24084481-24084570,24084640-24085220,
24085653-24085822,24086006-24087074
Length = 649
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 188 QPPPEIPDGPS-HKHAHNYYYTRDARREVAPPIDVTKELLSAS 313
+PPP +P P + HA Y+YT + P E SAS
Sbjct: 502 RPPPPMPSYPDRYGHADRYHYTAPSATYDPPAYASYSEPYSAS 544
>06_03_1258 + 28796643-28798169
Length = 508
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 132 CVGSIQMPFVLSHWFRLEPSLLQKSQTDPRTSM 230
CVG + F +H RL+P+LL+ + D + +
Sbjct: 395 CVGERLVVFTTNHTDRLDPALLRPGRMDRKVEL 427
>05_01_0206 + 1487034-1489430
Length = 798
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 107 CRLSGTSSLCRKHTNALRFEPLVSPRTQPPPEIP 208
C++SG +CR+ + P SPRT PP P
Sbjct: 318 CKVSG-DVICRRFCDTSPPPPPPSPRTPSPPATP 350
>05_01_0063 + 446761-447681
Length = 306
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 208 WDFWRRLGSRR 176
W FWRR GSRR
Sbjct: 87 WQFWRRAGSRR 97
>04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859
Length = 429
Score = 27.1 bits (57), Expect = 9.6
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 170 LVSPRTQPPPEIPDGPSHKHAHNYYYTR---DARREVAPPIDVTKELLSASSDKGAPKQA 340
LV+P PPPEI D P+H + +R D+ E+ PP ++++ + + +
Sbjct: 137 LVAP-PPPPPEIVDLPAHDVEELEWVSRIMDDSLSELPPPPQPPASVVASLAARPPQPRQ 195
Query: 341 ANVRPTPG 364
RP G
Sbjct: 196 LQRRPQDG 203
>03_02_0149 +
5933134-5933207,5935039-5935267,5935370-5935468,
5935582-5935616,5935694-5935769,5936552-5936662,
5937001-5937087,5937302-5937395,5937489-5937606,
5938047-5938542,5939263-5939298,5940047-5940578,
5940668-5940792
Length = 703
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 167 PLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPP 280
P P++ PPP P PS++ + N D + +APP
Sbjct: 592 PPPPPKSMPPPP-PKFPSNEMSRNEDRRSDLNKPMAPP 628
>02_01_0277 + 1848286-1848561
Length = 91
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 179 PRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPP 280
P PP P GPSH+ HN T +R+ PP
Sbjct: 50 PVRHKPPVPPSGPSHR--HNKRATVPRKRKHFPP 81
>01_06_0276 - 28084746-28085003,28085103-28085357,28085531-28085798,
28085948-28086253,28086369-28086643,28087034-28087252,
28087486-28089015,28089236-28089397,28089512-28089666,
28090195-28091064,28091363-28091832,28091917-28091981,
28092105-28092448,28092531-28092710,28092817-28092920,
28093053-28093162,28093648-28093744,28094138-28094238,
28094324-28094476,28094561-28094674,28094795-28094884,
28094960-28095307
Length = 2157
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +2
Query: 149 NALRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTK 295
+ALR L P PPP D + + +Y++ ++ + P+ + K
Sbjct: 879 DALRLHELAFPSRAPPPGSADAKALPNPGDYHWRKNGEVHLNDPLAMAK 927
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,803,488
Number of Sequences: 37544
Number of extensions: 305542
Number of successful extensions: 1049
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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