Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_G19
(540 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542266-1|CAG47062.1| 118|Homo sapiens NDUFA7 protein. 62 9e-10
CR456915-1|CAG33196.1| 118|Homo sapiens NDUFA7 protein. 62 9e-10
BC107892-1|AAI07893.1| 121|Homo sapiens NDUFA7 protein protein. 62 9e-10
BC003102-1|AAH03102.1| 113|Homo sapiens NADH dehydrogenase (ubi... 62 9e-10
AF050637-1|AAD05427.1| 113|Homo sapiens NADH-ubiquinone oxidore... 62 9e-10
BC150262-1|AAI50263.1| 1516|Homo sapiens RUN and SH3 domain cont... 32 1.5
BC146654-1|AAI46655.1| 1516|Homo sapiens RUSC2 protein protein. 32 1.5
BC132770-1|AAI32771.1| 1516|Homo sapiens RUN and SH3 domain cont... 32 1.5
BC132766-1|AAI32767.1| 1516|Homo sapiens RUN and SH3 domain cont... 32 1.5
BC064843-1|AAH64843.1| 1301|Homo sapiens RUSC2 protein protein. 32 1.5
AL133476-3|CAH70650.1| 1516|Homo sapiens RUN and SH3 domain cont... 32 1.5
AB002373-1|BAA20830.2| 1540|Homo sapiens KIAA0375 protein protein. 32 1.5
BC068470-1|AAH68470.1| 711|Homo sapiens mitogen-activated prote... 31 2.0
AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens ... 31 2.6
AK054885-1|BAB70821.1| 306|Homo sapiens protein ( Homo sapiens ... 31 2.6
AF074091-1|AAD20443.1| 711|Homo sapiens islet-brain 1 protein. 31 3.4
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 30 4.5
AK131399-1|BAD18546.1| 907|Homo sapiens protein ( Homo sapiens ... 30 4.5
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain... 30 4.5
BC151235-1|AAI51236.1| 718|Homo sapiens ATP-binding cassette, s... 30 6.0
BC141836-1|AAI41837.1| 693|Homo sapiens ABCB8 protein protein. 30 6.0
BC141814-1|AAI41815.1| 718|Homo sapiens ATP-binding cassette, s... 30 6.0
AK222911-1|BAD96631.1| 718|Homo sapiens ATP-binding cassette, s... 30 6.0
AK094636-1|BAC04392.1| 701|Homo sapiens protein ( Homo sapiens ... 30 6.0
AK002018-1|BAA92038.1| 735|Homo sapiens protein ( Homo sapiens ... 30 6.0
AF047690-1|AAD15748.1| 718|Homo sapiens ATP-binding cassette pr... 30 6.0
U59464-1|AAC50550.1| 1447|Homo sapiens PATCHED protein. 29 7.9
U43148-1|AAC50496.1| 1296|Homo sapiens PTC protein. 29 7.9
AY395768-1|AAR21239.1| 651|Homo sapiens patched protein. 29 7.9
AL161729-2|CAH73818.1| 1296|Homo sapiens patched homolog 1 (Dros... 29 7.9
AL161729-1|CAH73817.1| 1447|Homo sapiens patched homolog 1 (Dros... 29 7.9
AB209495-1|BAD92732.1| 586|Homo sapiens patched variant protein. 29 7.9
>CR542266-1|CAG47062.1| 118|Homo sapiens NDUFA7 protein.
Length = 118
Score = 62.5 bits (145), Expect = 9e-10
Identities = 30/62 (48%), Positives = 39/62 (62%)
Frame = +2
Query: 155 LRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPK 334
LR++ +S RTQPPP++P GPSHK ++NYY TRD RRE PP + + S K A
Sbjct: 31 LRYQE-ISKRTQPPPKLPVGPSHKLSNNYYCTRDGRRESVPPSIIMSSQKALVSGKPAES 89
Query: 335 QA 340
A
Sbjct: 90 SA 91
>CR456915-1|CAG33196.1| 118|Homo sapiens NDUFA7 protein.
Length = 118
Score = 62.5 bits (145), Expect = 9e-10
Identities = 30/62 (48%), Positives = 39/62 (62%)
Frame = +2
Query: 155 LRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPK 334
LR++ +S RTQPPP++P GPSHK ++NYY TRD RRE PP + + S K A
Sbjct: 31 LRYQE-ISKRTQPPPKLPVGPSHKLSNNYYCTRDGRRESVPPSIIMSSQKALVSGKPAES 89
Query: 335 QA 340
A
Sbjct: 90 SA 91
>BC107892-1|AAI07893.1| 121|Homo sapiens NDUFA7 protein protein.
Length = 121
Score = 62.5 bits (145), Expect = 9e-10
Identities = 30/62 (48%), Positives = 39/62 (62%)
Frame = +2
Query: 155 LRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPK 334
LR++ +S RTQPPP++P GPSHK ++NYY TRD RRE PP + + S K A
Sbjct: 34 LRYQE-ISKRTQPPPKLPVGPSHKLSNNYYCTRDGRRESVPPSIIMSSQKALVSGKPAES 92
Query: 335 QA 340
A
Sbjct: 93 SA 94
>BC003102-1|AAH03102.1| 113|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 7, 14.5kDa protein.
Length = 113
Score = 62.5 bits (145), Expect = 9e-10
Identities = 30/62 (48%), Positives = 39/62 (62%)
Frame = +2
Query: 155 LRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPK 334
LR++ +S RTQPPP++P GPSHK ++NYY TRD RRE PP + + S K A
Sbjct: 26 LRYQE-ISKRTQPPPKLPVGPSHKLSNNYYCTRDGRRESVPPSIIMSSQKALVSGKPAES 84
Query: 335 QA 340
A
Sbjct: 85 SA 86
>AF050637-1|AAD05427.1| 113|Homo sapiens NADH-ubiquinone
oxidoreductase B14.5A subunit protein.
Length = 113
Score = 62.5 bits (145), Expect = 9e-10
Identities = 30/62 (48%), Positives = 39/62 (62%)
Frame = +2
Query: 155 LRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPK 334
LR++ +S RTQPPP++P GPSHK ++NYY TRD RRE PP + + S K A
Sbjct: 26 LRYQE-ISKRTQPPPKLPVGPSHKLSNNYYCTRDGRRESVPPSIIMSSQKALVSGKPAES 84
Query: 335 QA 340
A
Sbjct: 85 SA 86
>BC150262-1|AAI50263.1| 1516|Homo sapiens RUN and SH3 domain
containing 2 protein.
Length = 1516
Score = 31.9 bits (69), Expect = 1.5
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = +2
Query: 80 STNATFHLHCRLSGTSSLCRKHTNALRFEPLVSPRTQPPPEI---PDGPSHKHAHNYYYT 250
S +A HL+CRL+G ++ F+ S +PP E PDG S + +
Sbjct: 935 SLSAASHLNCRLNG-QAVKPLPLTCPDFQDPFSLTEKPPAEFCLSPDGSSEAISIDLLQK 993
Query: 251 RDARREVAPPIDVTKELLSASSDKGAPKQAAN--VRPTPGHL 370
+ + V +D+ S D G + N V P GHL
Sbjct: 994 KGLVKAVNIAVDLIVAHFGTSRDPGVKAKLGNSSVSPNVGHL 1035
>BC146654-1|AAI46655.1| 1516|Homo sapiens RUSC2 protein protein.
Length = 1516
Score = 31.9 bits (69), Expect = 1.5
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = +2
Query: 80 STNATFHLHCRLSGTSSLCRKHTNALRFEPLVSPRTQPPPEI---PDGPSHKHAHNYYYT 250
S +A HL+CRL+G ++ F+ S +PP E PDG S + +
Sbjct: 935 SLSAASHLNCRLNG-QAVKPLPLTCPDFQDPFSLTEKPPAEFCLSPDGSSEAISIDLLQK 993
Query: 251 RDARREVAPPIDVTKELLSASSDKGAPKQAAN--VRPTPGHL 370
+ + V +D+ S D G + N V P GHL
Sbjct: 994 KGLVKAVNIAVDLIVAHFGTSRDPGVKAKLGNSSVSPNVGHL 1035
>BC132770-1|AAI32771.1| 1516|Homo sapiens RUN and SH3 domain
containing 2 protein.
Length = 1516
Score = 31.9 bits (69), Expect = 1.5
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = +2
Query: 80 STNATFHLHCRLSGTSSLCRKHTNALRFEPLVSPRTQPPPEI---PDGPSHKHAHNYYYT 250
S +A HL+CRL+G ++ F+ S +PP E PDG S + +
Sbjct: 935 SLSAASHLNCRLNG-QAVKPLPLTCPDFQDPFSLTEKPPAEFCLSPDGSSEAISIDLLQK 993
Query: 251 RDARREVAPPIDVTKELLSASSDKGAPKQAAN--VRPTPGHL 370
+ + V +D+ S D G + N V P GHL
Sbjct: 994 KGLVKAVNIAVDLIVAHFGTSRDPGVKAKLGNSSVSPNVGHL 1035
>BC132766-1|AAI32767.1| 1516|Homo sapiens RUN and SH3 domain
containing 2 protein.
Length = 1516
Score = 31.9 bits (69), Expect = 1.5
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = +2
Query: 80 STNATFHLHCRLSGTSSLCRKHTNALRFEPLVSPRTQPPPEI---PDGPSHKHAHNYYYT 250
S +A HL+CRL+G ++ F+ S +PP E PDG S + +
Sbjct: 935 SLSAASHLNCRLNG-QAVKPLPLTCPDFQDPFSLTEKPPAEFCLSPDGSSEAISIDLLQK 993
Query: 251 RDARREVAPPIDVTKELLSASSDKGAPKQAAN--VRPTPGHL 370
+ + V +D+ S D G + N V P GHL
Sbjct: 994 KGLVKAVNIAVDLIVAHFGTSRDPGVKAKLGNSSVSPNVGHL 1035
>BC064843-1|AAH64843.1| 1301|Homo sapiens RUSC2 protein protein.
Length = 1301
Score = 31.9 bits (69), Expect = 1.5
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = +2
Query: 80 STNATFHLHCRLSGTSSLCRKHTNALRFEPLVSPRTQPPPEI---PDGPSHKHAHNYYYT 250
S +A HL+CRL+G ++ F+ S +PP E PDG S + +
Sbjct: 720 SLSAASHLNCRLNG-QAVKPLPLTCPDFQDPFSLTEKPPAEFCLSPDGSSEAISIDLLQK 778
Query: 251 RDARREVAPPIDVTKELLSASSDKGAPKQAAN--VRPTPGHL 370
+ + V +D+ S D G + N V P GHL
Sbjct: 779 KGLVKAVNIAVDLIVAHFGTSRDPGVKAKLGNSSVSPNVGHL 820
>AL133476-3|CAH70650.1| 1516|Homo sapiens RUN and SH3 domain
containing 2 protein.
Length = 1516
Score = 31.9 bits (69), Expect = 1.5
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = +2
Query: 80 STNATFHLHCRLSGTSSLCRKHTNALRFEPLVSPRTQPPPEI---PDGPSHKHAHNYYYT 250
S +A HL+CRL+G ++ F+ S +PP E PDG S + +
Sbjct: 935 SLSAASHLNCRLNG-QAVKPLPLTCPDFQDPFSLTEKPPAEFCLSPDGSSEAISIDLLQK 993
Query: 251 RDARREVAPPIDVTKELLSASSDKGAPKQAAN--VRPTPGHL 370
+ + V +D+ S D G + N V P GHL
Sbjct: 994 KGLVKAVNIAVDLIVAHFGTSRDPGVKAKLGNSSVSPNVGHL 1035
>AB002373-1|BAA20830.2| 1540|Homo sapiens KIAA0375 protein protein.
Length = 1540
Score = 31.9 bits (69), Expect = 1.5
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = +2
Query: 80 STNATFHLHCRLSGTSSLCRKHTNALRFEPLVSPRTQPPPEI---PDGPSHKHAHNYYYT 250
S +A HL+CRL+G ++ F+ S +PP E PDG S + +
Sbjct: 959 SLSAASHLNCRLNG-QAVKPLPLTCPDFQDPFSLTEKPPAEFCLSPDGSSEAISIDLLQK 1017
Query: 251 RDARREVAPPIDVTKELLSASSDKGAPKQAAN--VRPTPGHL 370
+ + V +D+ S D G + N V P GHL
Sbjct: 1018 KGLVKAVNIAVDLIVAHFGTSRDPGVKAKLGNSSVSPNVGHL 1059
>BC068470-1|AAH68470.1| 711|Homo sapiens mitogen-activated protein
kinase 8 interacting protein 1 protein.
Length = 711
Score = 31.5 bits (68), Expect = 2.0
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +2
Query: 110 RLSGTSSLCRKHTNALRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDV 289
R + T S CR+ T ++P PP P G H H +Y D R E I +
Sbjct: 229 RGTSTDSPCRRSTATQ-----MAPPGGPPAATPGGRGHSHRDRIHYQADVRLEATEEIYL 283
Query: 290 T 292
T
Sbjct: 284 T 284
>AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ40133 fis, clone TESTI2012231. ).
Length = 225
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 98 HLHCRLSGTSSLCRKHTNALRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYT 250
H+H + ++ C HT+A E +SP P HKH +Y YT
Sbjct: 115 HMHTPFTSINTPCIHHTHAPLTE--ISPHKPLKPTYTPHTHHKHTSHYSYT 163
>AK054885-1|BAB70821.1| 306|Homo sapiens protein ( Homo sapiens
cDNA FLJ30323 fis, clone BRACE2007109, highly similar to
Extensin-like protein NG5. ).
Length = 306
Score = 31.1 bits (67), Expect = 2.6
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = +2
Query: 143 HTNALRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDK 322
HT+ F P P P PS H H++YY + + P + SA++ +
Sbjct: 14 HTSPPPFNAPQPPAEPPAPPPQAAPSSHHHHHHYYHQSGTATL-PRLGAGGLASSAATAQ 72
Query: 323 GAPKQAANVRPTPGH 367
P +A + P P H
Sbjct: 73 RGPSSSATL-PRPPH 86
>AF074091-1|AAD20443.1| 711|Homo sapiens islet-brain 1 protein.
Length = 711
Score = 30.7 bits (66), Expect = 3.4
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +2
Query: 110 RLSGTSSLCRKHTNALRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDV 289
R + T S CR+ T ++P PP P G H H +Y D R E I +
Sbjct: 229 RGTSTDSPCRRSTATQ-----MAPPGGPPAAPPGGRGHSHRDRIHYQADVRLEATEEIYL 283
Query: 290 T 292
T
Sbjct: 284 T 284
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 30.3 bits (65), Expect = 4.5
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = +2
Query: 80 STNATFHLHCRLSGTSSLCRKHTN--ALRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTR 253
+T+ + HC +SG + + A +P P P+ S K Y +
Sbjct: 2310 ATDQVVYKHCTVSGQTDAAKNAAAPAASSGSGTSTPLIPSPKPEPEKTSPKP--EYPAEK 2367
Query: 254 DARREVAPPIDVTKELLSASSDKGAPKQAANVRPTP 361
+ + +PP TK L +S P QA+ +P P
Sbjct: 2368 PKQSDPSPPSQGTKPALPLASTSSDPPQASTAQPQP 2403
>AK131399-1|BAD18546.1| 907|Homo sapiens protein ( Homo sapiens
cDNA FLJ16492 fis, clone CTONG2028758, highly similar
to Mus musculus zfh-4 mRNA for zinc-finger homeodomain
protein 4. ).
Length = 907
Score = 30.3 bits (65), Expect = 4.5
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = +2
Query: 80 STNATFHLHCRLSGTSSLCRKHTN--ALRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTR 253
+T+ + HC +SG + + A +P P P+ S K Y +
Sbjct: 46 ATDQVVYKHCTVSGQTDAAKNAAAPAASSGSGTSTPLIPSPKPEPEKTSPKP--EYPAEK 103
Query: 254 DARREVAPPIDVTKELLSASSDKGAPKQAANVRPTP 361
+ + +PP TK L +S P QA+ +P P
Sbjct: 104 PKQSDPSPPSQGTKPALPLASTSSDPPQASTAQPQP 139
>AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain
protein 4 protein.
Length = 3599
Score = 30.3 bits (65), Expect = 4.5
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = +2
Query: 80 STNATFHLHCRLSGTSSLCRKHTN--ALRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTR 253
+T+ + HC +SG + + A +P P P+ S K Y +
Sbjct: 2338 ATDQVVYKHCTVSGQTDAAKNAAAPAASSGSGTSTPLIPSPKPEPEKTSPKP--EYPAEK 2395
Query: 254 DARREVAPPIDVTKELLSASSDKGAPKQAANVRPTP 361
+ + +PP TK L +S P QA+ +P P
Sbjct: 2396 PKQSDPSPPSQGTKPALPLASTSSDPPQASTAQPQP 2431
>BC151235-1|AAI51236.1| 718|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 8 protein.
Length = 718
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 143 HTNALRFEPLVSPRT-QPPPEIPDGP-SHKH 229
+ +R + L +PRT PPP+ P+GP SH+H
Sbjct: 686 YAELIRRQALDAPRTAAPPPKKPEGPRSHQH 716
>BC141836-1|AAI41837.1| 693|Homo sapiens ABCB8 protein protein.
Length = 693
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 143 HTNALRFEPLVSPRT-QPPPEIPDGP-SHKH 229
+ +R + L +PRT PPP+ P+GP SH+H
Sbjct: 661 YAELIRRQALDAPRTAAPPPKKPEGPRSHQH 691
>BC141814-1|AAI41815.1| 718|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 8 protein.
Length = 718
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 143 HTNALRFEPLVSPRT-QPPPEIPDGP-SHKH 229
+ +R + L +PRT PPP+ P+GP SH+H
Sbjct: 686 YAELIRRQALDAPRTAAPPPKKPEGPRSHQH 716
>AK222911-1|BAD96631.1| 718|Homo sapiens ATP-binding cassette,
sub-family B, member 8 variant protein.
Length = 718
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 143 HTNALRFEPLVSPRT-QPPPEIPDGP-SHKH 229
+ +R + L +PRT PPP+ P+GP SH+H
Sbjct: 686 YAELIRRQALDAPRTAAPPPKKPEGPRSHQH 716
>AK094636-1|BAC04392.1| 701|Homo sapiens protein ( Homo sapiens
cDNA FLJ37317 fis, clone BRAMY2017455, highly similar to
Homo sapiens ATP-binding cassette protein M-ABC1 mRNA.
).
Length = 701
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 143 HTNALRFEPLVSPRT-QPPPEIPDGP-SHKH 229
+ +R + L +PRT PPP+ P+GP SH+H
Sbjct: 669 YAELIRRQALDAPRTAAPPPKKPEGPRSHQH 699
>AK002018-1|BAA92038.1| 735|Homo sapiens protein ( Homo sapiens
cDNA FLJ11156 fis, clone PLACE1006956, weakly similar to
ATP-DEPENDENT PERMEASE MDL1. ).
Length = 735
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 143 HTNALRFEPLVSPRT-QPPPEIPDGP-SHKH 229
+ +R + L +PRT PPP+ P+GP SH+H
Sbjct: 703 YAELIRRQALDAPRTAAPPPKKPEGPRSHQH 733
>AF047690-1|AAD15748.1| 718|Homo sapiens ATP-binding cassette
protein M-ABC1 protein.
Length = 718
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 143 HTNALRFEPLVSPRT-QPPPEIPDGP-SHKH 229
+ +R + L +PRT PPP+ P+GP SH+H
Sbjct: 686 YAELIRRQALDAPRTAAPPPKKPEGPRSHQH 716
>U59464-1|AAC50550.1| 1447|Homo sapiens PATCHED protein.
Length = 1447
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 227 HAHNYYYTRDARREVA-PPIDVTKELLSASS 316
H H YY T + R E++ P+ VT++ LS S
Sbjct: 671 HTHVYYTTAEPRSEISVQPVTVTQDTLSCQS 701
>U43148-1|AAC50496.1| 1296|Homo sapiens PTC protein.
Length = 1296
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 227 HAHNYYYTRDARREVA-PPIDVTKELLSASS 316
H H YY T + R E++ P+ VT++ LS S
Sbjct: 520 HTHVYYTTAEPRSEISVQPVTVTQDTLSCQS 550
>AY395768-1|AAR21239.1| 651|Homo sapiens patched protein.
Length = 651
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 227 HAHNYYYTRDARREVA-PPIDVTKELLSASS 316
H H YY T + R E++ P+ VT++ LS S
Sbjct: 266 HTHVYYTTAEPRSEISVQPVTVTQDTLSCQS 296
>AL161729-2|CAH73818.1| 1296|Homo sapiens patched homolog 1
(Drosophila) protein.
Length = 1296
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 227 HAHNYYYTRDARREVA-PPIDVTKELLSASS 316
H H YY T + R E++ P+ VT++ LS S
Sbjct: 520 HTHVYYTTAEPRSEISVQPVTVTQDTLSCQS 550
>AL161729-1|CAH73817.1| 1447|Homo sapiens patched homolog 1
(Drosophila) protein.
Length = 1447
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 227 HAHNYYYTRDARREVA-PPIDVTKELLSASS 316
H H YY T + R E++ P+ VT++ LS S
Sbjct: 671 HTHVYYTTAEPRSEISVQPVTVTQDTLSCQS 701
>AB209495-1|BAD92732.1| 586|Homo sapiens patched variant protein.
Length = 586
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 227 HAHNYYYTRDARREVA-PPIDVTKELLSASS 316
H H YY T + R E++ P+ VT++ LS S
Sbjct: 107 HTHVYYTTAEPRSEISVQPVTVTQDTLSCQS 137
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,569,828
Number of Sequences: 237096
Number of extensions: 1635721
Number of successful extensions: 4634
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 4313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4602
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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