Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G19
         (540 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81538-3|CAB04385.1|  168|Caenorhabditis elegans Hypothetical pr...    42   2e-04
AF000261-1|AAB52922.1|  505|Caenorhabditis elegans Hypothetical ...    33   0.13 
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    32   0.30 
AF125952-5|AAD14697.2|  327|Caenorhabditis elegans Serpentine re...    31   0.53 
AC006722-11|AAW88389.1|  327|Caenorhabditis elegans Serpentine r...    31   0.53 
Z95392-2|CAK55178.1|  356|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z95392-1|CAB08740.1|  342|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z83246-4|CAB05844.1|  414|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z73908-6|CAA98132.1|  414|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z73098-14|CAK55194.1|  356|Caenorhabditis elegans Hypothetical p...    29   1.6  
AL023829-2|CAK55191.1|  356|Caenorhabditis elegans Hypothetical ...    29   1.6  
AL023829-1|CAA19471.1|  342|Caenorhabditis elegans Hypothetical ...    29   1.6  
Z81040-2|CAB02782.2|  466|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U32305-18|AAK18852.2|  719|Caenorhabditis elegans Hypothetical p...    28   3.7  
AF078792-3|AAC26945.2|  635|Caenorhabditis elegans Hypothetical ...    28   3.7  
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1...    27   6.5  
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec...    27   6.5  
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l...    27   6.5  

>Z81538-3|CAB04385.1|  168|Caenorhabditis elegans Hypothetical
           protein F45H10.3 protein.
          Length = 168

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 32/91 (35%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
 Frame = +2

Query: 143 HTNALRFEPLVSPR--TQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASS 316
           + N LRF    S R  +   P +P G  HK A NYY TRD RR V  P  +         
Sbjct: 50  YQNPLRFPNTQSARPCSAELPALPGGVHHKLADNYYLTRDGRRNVDAPKVLYSSGEFVGG 109

Query: 317 DKGAPKQ-----AAN---VRPTPGHLYAWDK 385
           +K  P Q     A N     PTPG    W +
Sbjct: 110 EKAQPAQVNQGVATNFGLTAPTPGFGAEWSR 140


>AF000261-1|AAB52922.1|  505|Caenorhabditis elegans Hypothetical
           protein F19B10.11 protein.
          Length = 505

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +2

Query: 167 PLVSPRTQP-PPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPKQAA 343
           P V P   P PPE+   PS + A   Y   + R +V   +D+T  L +    +  P++  
Sbjct: 374 PNVKPLVVPSPPELSQVPSFEEACEIYERWEDRDKVIEGVDLTTFLFNPQGSRKMPQKVR 433

Query: 344 NV 349
           NV
Sbjct: 434 NV 435


>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
           protein Y40C5A.3 protein.
          Length = 2344

 Score = 31.9 bits (69), Expect = 0.30
 Identities = 18/65 (27%), Positives = 24/65 (36%)
 Frame = +2

Query: 167 PLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPKQAAN 346
           P  SP +  P  I      K    Y    +  R   PP+     ++  SS    PKQ   
Sbjct: 420 PSPSPASNVPVTITLSAPAKSPATYGPAPEPSRPAVPPVAPAPSVIPTSSQPSQPKQTQP 479

Query: 347 VRPTP 361
            +PTP
Sbjct: 480 AQPTP 484


>AF125952-5|AAD14697.2|  327|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 61 protein.
          Length = 327

 Score = 31.1 bits (67), Expect = 0.53
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = +3

Query: 93  HFTCIAGFQELPPCVGSIQMPFVLSHWFRLEPSLLQKSQTDPRTSMPTTTITQETLDAKL 272
           H  C+  F        +I  P + ++W R+   +L+ S +    S  +T +  E L   L
Sbjct: 183 HHFCM-NFNTAIYAFNTIYFPIIGNYWKRIAMKILKSSIST--ASSKSTRVMSELLVKGL 239

Query: 273 HLQLMLPRNCLV 308
           +LQ++LP  C V
Sbjct: 240 NLQVLLPLICYV 251


>AC006722-11|AAW88389.1|  327|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 75 protein.
          Length = 327

 Score = 31.1 bits (67), Expect = 0.53
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = +3

Query: 93  HFTCIAGFQELPPCVGSIQMPFVLSHWFRLEPSLLQKSQTDPRTSMPTTTITQETLDAKL 272
           H  C+  F        +I  P + ++W R+   +L+ S +    S  +T +  E L   L
Sbjct: 183 HHFCM-NFNTAIYAFNTIYFPIIGNYWKRIAMKILKSSIST--ASSKSTRVMSELLVKGL 239

Query: 273 HLQLMLPRNCLV 308
           +LQ++LP  C V
Sbjct: 240 NLQVLLPLICYV 251


>Z95392-2|CAK55178.1|  356|Caenorhabditis elegans Hypothetical
           protein H27A22.1b protein.
          Length = 356

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 116 SGTSSLCRKHTNALRFEPLVSPRTQPPPEIPDGPSHKHAHNY 241
           S T  LCR  TN  RF+ +++P     P I D   H+   +Y
Sbjct: 49  SSTLRLCRDFTNTTRFKEILAPIM--VPRIVDTKQHRQVGDY 88


>Z95392-1|CAB08740.1|  342|Caenorhabditis elegans Hypothetical
           protein H27A22.1a protein.
          Length = 342

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 116 SGTSSLCRKHTNALRFEPLVSPRTQPPPEIPDGPSHKHAHNY 241
           S T  LCR  TN  RF+ +++P     P I D   H+   +Y
Sbjct: 35  SSTLRLCRDFTNTTRFKEILAPIM--VPRIVDTKQHRQVGDY 74


>Z83246-4|CAB05844.1|  414|Caenorhabditis elegans Hypothetical
           protein F53B2.6 protein.
          Length = 414

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
 Frame = +2

Query: 179 PRTQPP----PEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSD--KGAPKQA 340
           P T PP    P     P++ H  N    R ARR   P    T++LLS+SS+  K  P   
Sbjct: 257 PPTPPPAAMLPTKNKYPTYHHDLNEECQRKARRRNHPRRGETQKLLSSSSECLKYYPVDM 316

Query: 341 ANVRPT 358
              RPT
Sbjct: 317 PETRPT 322


>Z73908-6|CAA98132.1|  414|Caenorhabditis elegans Hypothetical
           protein F53B2.6 protein.
          Length = 414

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
 Frame = +2

Query: 179 PRTQPP----PEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSD--KGAPKQA 340
           P T PP    P     P++ H  N    R ARR   P    T++LLS+SS+  K  P   
Sbjct: 257 PPTPPPAAMLPTKNKYPTYHHDLNEECQRKARRRNHPRRGETQKLLSSSSECLKYYPVDM 316

Query: 341 ANVRPT 358
              RPT
Sbjct: 317 PETRPT 322


>Z73098-14|CAK55194.1|  356|Caenorhabditis elegans Hypothetical
           protein H27A22.1b protein.
          Length = 356

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 116 SGTSSLCRKHTNALRFEPLVSPRTQPPPEIPDGPSHKHAHNY 241
           S T  LCR  TN  RF+ +++P     P I D   H+   +Y
Sbjct: 49  SSTLRLCRDFTNTTRFKEILAPIM--VPRIVDTKQHRQVGDY 88


>AL023829-2|CAK55191.1|  356|Caenorhabditis elegans Hypothetical
           protein H27A22.1b protein.
          Length = 356

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 116 SGTSSLCRKHTNALRFEPLVSPRTQPPPEIPDGPSHKHAHNY 241
           S T  LCR  TN  RF+ +++P     P I D   H+   +Y
Sbjct: 49  SSTLRLCRDFTNTTRFKEILAPIM--VPRIVDTKQHRQVGDY 88


>AL023829-1|CAA19471.1|  342|Caenorhabditis elegans Hypothetical
           protein H27A22.1a protein.
          Length = 342

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 116 SGTSSLCRKHTNALRFEPLVSPRTQPPPEIPDGPSHKHAHNY 241
           S T  LCR  TN  RF+ +++P     P I D   H+   +Y
Sbjct: 35  SSTLRLCRDFTNTTRFKEILAPIM--VPRIVDTKQHRQVGDY 74


>Z81040-2|CAB02782.2|  466|Caenorhabditis elegans Hypothetical
           protein C26E1.2 protein.
          Length = 466

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +1

Query: 28  IYI-LSKIINNLRW*RLKFH*RDISPALQAFRNFLLV 135
           +Y+ +S ++NN+ W R+KF  RD      +  N L V
Sbjct: 127 VYLAISPMVNNVNWTRIKFDRRDAMMCYNSLTNILQV 163


>U32305-18|AAK18852.2|  719|Caenorhabditis elegans Hypothetical
           protein B0336.3 protein.
          Length = 719

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = +2

Query: 167 PLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLS-ASSDKGAPKQAA 343
           P ++  + PPP IP      H    Y  +       PP    + +++   S +GAP+   
Sbjct: 285 PALNNYSIPPPPIPGQWQQPHVAAQYVPQSVSSYSQPPPAAAQGVVTQPGSFRGAPRGRG 344

Query: 344 NVRPTPG 364
           N+R   G
Sbjct: 345 NIRGRGG 351


>AF078792-3|AAC26945.2|  635|Caenorhabditis elegans Hypothetical
           protein Y40D12A.1a protein.
          Length = 635

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = -3

Query: 412 VRITCLFIMFIPSIKVSRCRSHISSLFRSPFV*ASTKQFLGNINWRCNFASS 257
           +++  +  +F+  I + +  SH S ++       STK      +WR NF++S
Sbjct: 448 IQLRTIDSLFVDPIALKQMLSHNSKIYYDLLEKVSTKNSADECDWRKNFSNS 499


>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
           isoform b protein.
          Length = 1444

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +2

Query: 224 KHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPKQAANVRPTP 361
           +  H+Y+Y R   ++V PP   +    S   D   P+Q  N+   P
Sbjct: 279 RRTHSYWYKRP--KKVMPPSSSSSLKTSDDDDDSTPRQIKNLTVNP 322


>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor
            protein 2 protein.
          Length = 1338

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -3

Query: 364  SRCR-SHISSLFRSPFV*ASTKQFLGNINWRCNFASSVSCVIVVVGMLVRGSVWDFWRRL 188
            S+C  +H++S      +     +  G +    +  S++ C I +V + +   V+ F+R L
Sbjct: 866  SQCSCTHLTSFAILMDISGQVGRLSGGLASALDVVSTIGCAISIVCLALSVCVFTFFRNL 925

Query: 187  GSRRNQWLKTKGICML 140
             + RN   +   +C+L
Sbjct: 926  QNVRNSIHRNLCLCLL 941


>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
            protein LAT-2 protein.
          Length = 1338

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -3

Query: 364  SRCR-SHISSLFRSPFV*ASTKQFLGNINWRCNFASSVSCVIVVVGMLVRGSVWDFWRRL 188
            S+C  +H++S      +     +  G +    +  S++ C I +V + +   V+ F+R L
Sbjct: 866  SQCSCTHLTSFAILMDISGQVGRLSGGLASALDVVSTIGCAISIVCLALSVCVFTFFRNL 925

Query: 187  GSRRNQWLKTKGICML 140
             + RN   +   +C+L
Sbjct: 926  QNVRNSIHRNLCLCLL 941


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,705,906
Number of Sequences: 27780
Number of extensions: 249789
Number of successful extensions: 744
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)