Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G19
         (540 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   2.6  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   3.5  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   3.5  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   3.5  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   3.5  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   3.5  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
 Frame = -1

Query: 234 WAC-LCEGPSGISGGGWVLGETNGS 163
           W C    GP   S GG V G + GS
Sbjct: 14  WCCDNLGGPGSSSAGGVVTGASGGS 38


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 149 NALRFEPLVSPRTQP 193
           NA RF P ++PR +P
Sbjct: 160 NAYRFRPPLNPRFEP 174


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 149 NALRFEPLVSPRTQP 193
           NA RF P ++PR +P
Sbjct: 163 NAYRFRPPLNPRFEP 177


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 149 NALRFEPLVSPRTQP 193
           NA RF P ++PR +P
Sbjct: 163 NAYRFRPPLNPRFEP 177


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 149 NALRFEPLVSPRTQP 193
           NA RF P ++PR +P
Sbjct: 163 NAYRFRPPLNPRFEP 177


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 149 NALRFEPLVSPRTQP 193
           NA RF P ++PR +P
Sbjct: 163 NAYRFRPPLNPRFEP 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,025
Number of Sequences: 438
Number of extensions: 3421
Number of successful extensions: 61
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)