Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G15
         (754 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    30   1.5  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    30   1.5  
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z99171-4|CAB16313.1|  722|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z99278-5|CAB16489.1|  290|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF022388-1|AAC38956.1|  290|Caenorhabditis elegans putative tran...    28   6.2  

>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
           protein F30A10.10 protein.
          Length = 1262

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +3

Query: 210 IRDSNTKVNRLVSDEKT---IIKESSVLCSVLCRGCRMDNYVY 329
           +R+     N+L  DEK    I+KE    CSV C   R D Y+Y
Sbjct: 763 MREEGNFNNQLEDDEKLVRRILKEEKQRCSVKCPSERPDGYLY 805


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
           protein F30A10.10 protein.
          Length = 1262

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +3

Query: 210 IRDSNTKVNRLVSDEKT---IIKESSVLCSVLCRGCRMDNYVY 329
           +R+     N+L  DEK    I+KE    CSV C   R D Y+Y
Sbjct: 763 MREEGNFNNQLEDDEKLVRRILKEEKQRCSVKCPSERPDGYLY 805


>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
           protein F40E10.4 protein.
          Length = 1410

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 656 VVFXNAINPLNADAFKGLGITALMMFNAGAXT 751
           V++ N I  L +D F+GLG   L++ NA   T
Sbjct: 341 VLYGNNITDLKSDTFEGLGSLQLLLLNANQLT 372


>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
           protein F40E10.4 protein.
          Length = 1410

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 656 VVFXNAINPLNADAFKGLGITALMMFNAGAXT 751
           V++ N I  L +D F+GLG   L++ NA   T
Sbjct: 341 VLYGNNITDLKSDTFEGLGSLQLLLLNANQLT 372


>Z99171-4|CAB16313.1|  722|Caenorhabditis elegans Hypothetical
           protein F47G4.4 protein.
          Length = 722

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -2

Query: 435 SSSPSVHQHCSGHADTDANASNNNISILKSRPVVLGKRNYPSYSHGTALNTTQT 274
           S SPS H+ C    + D +  N+ I  +K+ P +    N P  S G +   T+T
Sbjct: 294 SYSPS-HELCGSIYEEDEDVDNSPIDEVKALPELTELSNLPPRSPGLSCEETET 346


>Z99278-5|CAB16489.1|  290|Caenorhabditis elegans Hypothetical
           protein Y53C12B.5a protein.
          Length = 290

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 233 YFCIRVTDREHYTEPNGDQPVCRPLTCREPLRRCTL 126
           Y+C R  +        G +P CR L C  P R CT+
Sbjct: 26  YYCQRCLNHGELKPRKGHKPDCRYLKC--PCRECTM 59


>AF022388-1|AAC38956.1|  290|Caenorhabditis elegans putative
           transcription factor MAB-3 protein.
          Length = 290

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 233 YFCIRVTDREHYTEPNGDQPVCRPLTCREPLRRCTL 126
           Y+C R  +        G +P CR L C  P R CT+
Sbjct: 26  YYCQRCLNHGELKPRKGHKPDCRYLKC--PCRECTM 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,902,057
Number of Sequences: 27780
Number of extensions: 327776
Number of successful extensions: 849
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)