Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G15
         (754 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    25   1.0  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   5.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   7.1  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    22   7.1  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = +3

Query: 222 NTKVNRLVSDEKTIIKESSVLC 287
           N K++ L  D+++++KE++V C
Sbjct: 369 NMKISNLSFDKQSLLKENTVTC 390


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 228 KVNRLVSDEKTIIKESSVLCSVLCRGCRMDNYVYQV 335
           +VNRLV++ K I + +S   S     C +DN + ++
Sbjct: 95  QVNRLVNNCKDITESNSCKKSSKLLQCFIDNNLMKI 130


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 96  TDCYRCDKQCQC 131
           T  Y C+K+C C
Sbjct: 469 TPIYECNKRCNC 480


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 100 SVTISCTER*L*SDISTGRRARLTAN 23
           SVT    +R L    STG R R+++N
Sbjct: 128 SVTSMIQKRALGPSFSTGERCRISSN 153


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,108
Number of Sequences: 438
Number of extensions: 4374
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)