Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G11
         (374 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025468-4|AAB71045.1|  449|Caenorhabditis elegans Hypothetical ...    39   0.001
Z11505-1|CAA77582.1|  460|Caenorhabditis elegans Hypothetical pr...    31   0.27 
AC006617-11|AAF39766.2|  356|Caenorhabditis elegans Serpentine r...    31   0.27 
Z97191-2|CAB10025.1|  481|Caenorhabditis elegans Hypothetical pr...    29   1.1  
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z69634-2|CAA93451.2|  926|Caenorhabditis elegans Hypothetical pr...    27   3.3  
AF022973-2|AAC25800.2|  527|Caenorhabditis elegans Hypothetical ...    27   4.4  
AF022973-1|AAT81194.1|  513|Caenorhabditis elegans Hypothetical ...    27   4.4  
U58751-7|AAB00658.2|  729|Caenorhabditis elegans Hepatocyte grow...    27   5.8  
U00055-6|AAA50724.1|  494|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z48055-10|CAA88135.1|  573|Caenorhabditis elegans Hypothetical p...    26   7.6  
Z48055-1|CAA88134.1|  544|Caenorhabditis elegans Hypothetical pr...    26   7.6  
Z36282-3|CAA85289.1|  573|Caenorhabditis elegans Hypothetical pr...    26   7.6  
AC006722-5|AAK68410.3|  703|Caenorhabditis elegans Hypothetical ...    26   7.6  
AC006645-10|AAF39849.1|  746|Caenorhabditis elegans Hypothetical...    26   7.6  

>AF025468-4|AAB71045.1|  449|Caenorhabditis elegans Hypothetical
           protein T27A1.5 protein.
          Length = 449

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 19/77 (24%), Positives = 40/77 (51%)
 Frame = +3

Query: 33  LPMLEQIINIVGALFYSILGLIIPGVIETVFRWEDLGRWNWVFWKNLLIVLFGVCSLVSG 212
           +P L   I++VG++  + L L+ P +IE +  +       WV+ +N+ ++ F +    +G
Sbjct: 373 IPHLALFISLVGSVAGTSLTLVFPPLIELLCSYSKQELTKWVWIRNIGLMAFAMVGFTTG 432

Query: 213 CTVSVMDIINILNKKTV 263
              S++ II    K+ +
Sbjct: 433 TYASMVQIIEAFGKEDI 449


>Z11505-1|CAA77582.1|  460|Caenorhabditis elegans Hypothetical
           protein F59B2.2 protein.
          Length = 460

 Score = 31.1 bits (67), Expect = 0.27
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
 Frame = +3

Query: 21  IGIXLPMLEQIINIVGALFYSILGLIIPGVIETVFRWED-------LGRWNWVFWKNLLI 179
           + + +P LE +I +VG    ++  LI P   E +  W D         R   +F  NL++
Sbjct: 374 MAVLIPKLEIMIPLVGVTSGALCALIFPPFFEMITFWTDWKGLLTYRQRMTKIF-INLVV 432

Query: 180 VLFGVCSLVSGCTVSVMDII 239
           +  GV ++++G   ++  II
Sbjct: 433 MAIGVFAIIAGVYTNIHAII 452


>AC006617-11|AAF39766.2|  356|Caenorhabditis elegans Serpentine
           receptor, class z protein56 protein.
          Length = 356

 Score = 31.1 bits (67), Expect = 0.27
 Identities = 16/65 (24%), Positives = 36/65 (55%)
 Frame = +3

Query: 39  MLEQIINIVGALFYSILGLIIPGVIETVFRWEDLGRWNWVFWKNLLIVLFGVCSLVSGCT 218
           ML  I+ I+ AL Y  + + +  +       E+  +  ++FW+ +++V+F + SLV   T
Sbjct: 194 MLGYILLIISALLYLPIMISVRKLSHLASAQENKPQ-KYIFWQTMIVVIFQLISLVQSLT 252

Query: 219 VSVMD 233
           + +++
Sbjct: 253 LVLIN 257


>Z97191-2|CAB10025.1|  481|Caenorhabditis elegans Hypothetical
           protein H32K16.1 protein.
          Length = 481

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
 Frame = +3

Query: 21  IGIXLPMLEQIINIVGALFYSILGLIIPGVIE-----TVFRWE-DLGRWNWVFWKNLLIV 182
           I + +P L QII +VG     ++ LI+P  ++      VF+ + D+ ++      N+ + 
Sbjct: 399 IALIVPNLMQIIPLVGITSGLLISLILPSFLDCMVFLPVFKKQGDMFKFYQKLIINVFLF 458

Query: 183 LFGVCSLVSGCTVSVMDIIN 242
           + G   L +G   S+ DIIN
Sbjct: 459 VLGWFFLGAGLYSSIDDIIN 478


>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
           protein T04G9.1 protein.
          Length = 1610

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 15/68 (22%), Positives = 29/68 (42%)
 Frame = -2

Query: 205 TKEQTPKRTINRFFQKTQFHLPRSSHLNTVSITPGIMSPNME*NSAPTMLMICSSIGNXM 26
           ++E TP+  + R  +       R +   T S TP I+  N   +  P+ + +        
Sbjct: 386 SEEPTPRHPVTRVSKYAMAEFTRHTPTGTRSATPNILRKNRNTDGCPSPMGLIDHALFGS 445

Query: 25  PIPPQIQT 2
            +PP +Q+
Sbjct: 446 SMPPTVQS 453


>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
            F54B3.1b protein.
          Length = 3394

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = -2

Query: 166  FQKTQFHLPRSSH-LNTVSITPGIMSPNME*NSAPTMLMICSSI 38
            F+ T+ HL +S H + T+ +T GI+SP M   S+P+ +  CS +
Sbjct: 3272 FKITEGHLYKSKHPVTTIEMT-GILSPQM---SSPSSVKQCSRV 3311


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
            F54B3.1a protein.
          Length = 3396

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = -2

Query: 166  FQKTQFHLPRSSH-LNTVSITPGIMSPNME*NSAPTMLMICSSI 38
            F+ T+ HL +S H + T+ +T GI+SP M   S+P+ +  CS +
Sbjct: 3274 FKITEGHLYKSKHPVTTIEMT-GILSPQM---SSPSSVKQCSRV 3313


>Z69634-2|CAA93451.2|  926|Caenorhabditis elegans Hypothetical
           protein B0001.2 protein.
          Length = 926

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = -2

Query: 148 HLPRSSHLNTVSITPGIMSPNM---E*NSAPTMLMICSSIGNXMPIPPQI 8
           HLP  S +N     PGIM P        + P  LM      + M IPPQ+
Sbjct: 390 HLPEPSPMNWQMGPPGIMHPMRPIGHFGAIPNPLMYSMPYMSNMAIPPQM 439


>AF022973-2|AAC25800.2|  527|Caenorhabditis elegans Hypothetical
           protein F25G6.7a protein.
          Length = 527

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +3

Query: 75  FYSILGLIIPGVIETVFRWEDLGRWNWVFWKNLLIVLFGV 194
           F ++ G+I P + + + +      WN VF+ + +I +F +
Sbjct: 440 FVAVSGIIHPIITKMIVKDRTAAEWNLVFYISTVIAIFPI 479


>AF022973-1|AAT81194.1|  513|Caenorhabditis elegans Hypothetical
           protein F25G6.7b protein.
          Length = 513

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +3

Query: 75  FYSILGLIIPGVIETVFRWEDLGRWNWVFWKNLLIVLFGV 194
           F ++ G+I P + + + +      WN VF+ + +I +F +
Sbjct: 426 FVAVSGIIHPIITKMIVKDRTAAEWNLVFYISTVIAIFPI 465


>U58751-7|AAB00658.2|  729|Caenorhabditis elegans Hepatocyte growth
           factor-regulatedtk substrate (hrs) family protein 1
           protein.
          Length = 729

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -1

Query: 155 PIPSAQIFPSKYCLDYTWYYESQYGVEQCSDNVDDLFQHRQXYANSTTNPN 3
           P+  AQ    +Y   Y  YY+ Q   +Q +   +   Q  Q Y N TTN N
Sbjct: 618 PVQQAQ---QQYQQQYQGYYQQQQPYQQQAGYQNP--QQHQNYQNGTTNEN 663


>U00055-6|AAA50724.1|  494|Caenorhabditis elegans Hypothetical
           protein R02F2.8 protein.
          Length = 494

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 10/45 (22%), Positives = 24/45 (53%)
 Frame = +3

Query: 6   WICGGIGIXLPMLEQIINIVGALFYSILGLIIPGVIETVFRWEDL 140
           W    IG+ +P    +++++GA    ++ LI+P +     R +++
Sbjct: 339 WFVIFIGLSIPHFGPVLDLIGASTMVLMTLILPPIFYLSIRTQEI 383


>Z48055-10|CAA88135.1|  573|Caenorhabditis elegans Hypothetical
           protein K10G9.1 protein.
          Length = 573

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +3

Query: 36  PMLEQIINIVGALFYSILGLIIPGVIETVFRWEDLGRWNWVFWKNLLIVLFGV 194
           P+L  I N +GA    I G  + G++     +++   W WVF   + I +FG+
Sbjct: 418 PILMGIANGLGA----IAG--VGGIVTNSLTYQNPDGWQWVFLLAMSIDIFGI 464


>Z48055-1|CAA88134.1|  544|Caenorhabditis elegans Hypothetical
           protein T07A5.3 protein.
          Length = 544

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +3

Query: 36  PMLEQIINIVGALFYSILGLIIPGVIETVFRWEDLGRWNWVFWKNLLIVLFGV 194
           P+L  I N +GA    + G  + G++     +++   W WVF   + I +FGV
Sbjct: 418 PILMGIANGLGA----VAG--VGGMVTNTVTYQNPDGWKWVFLLAMAIDIFGV 464


>Z36282-3|CAA85289.1|  573|Caenorhabditis elegans Hypothetical
           protein K10G9.1 protein.
          Length = 573

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +3

Query: 36  PMLEQIINIVGALFYSILGLIIPGVIETVFRWEDLGRWNWVFWKNLLIVLFGV 194
           P+L  I N +GA    I G  + G++     +++   W WVF   + I +FG+
Sbjct: 418 PILMGIANGLGA----IAG--VGGIVTNSLTYQNPDGWQWVFLLAMSIDIFGI 464


>AC006722-5|AAK68410.3|  703|Caenorhabditis elegans Hypothetical
           protein Y19D10A.10 protein.
          Length = 703

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -2

Query: 121 TVSITPGIMSPNME*NSAPTMLMICSSIGNXMPIP 17
           +V + PG+ +P+ E N+   +L     +GN + +P
Sbjct: 153 SVGVVPGVWAPSNETNTFTAILSCALQLGNIICMP 187


>AC006645-10|AAF39849.1|  746|Caenorhabditis elegans Hypothetical
           protein F56A4.11 protein.
          Length = 746

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -2

Query: 121 TVSITPGIMSPNME*NSAPTMLMICSSIGNXMPIP 17
           +V + PG+ +P+ E N+   +L     +GN + +P
Sbjct: 196 SVGVVPGVWAPSNETNTFTAILSCALQLGNIICMP 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,974,883
Number of Sequences: 27780
Number of extensions: 139635
Number of successful extensions: 411
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)