Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G10
         (476 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    26   0.21 
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   1.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   2.5  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   3.3  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   3.3  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 332 IHVFFFLIPFSFHRRLRTTLVSIYLCLRIVVLSLST 225
           I   F L+P   H RL   +  +YL    VVLSL +
Sbjct: 13  ISKIFALLPVKKHHRLEKLVPCVYLTSFSVVLSLGS 48


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 385 FKFITDVKNIFSSFIKNVYMFFFF 314
           F+F+  V NIF +F+  ++    F
Sbjct: 66  FRFVYAVYNIFGAFVMGLFCILKF 89


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 419 CKKYWSCCNQT 451
           C +YW+C N T
Sbjct: 112 CTRYWTCWNGT 122



 Score = 21.0 bits (42), Expect = 5.8
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +2

Query: 419 CKKYWSCCN 445
           C +YW C N
Sbjct: 42  CDRYWECVN 50


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +2

Query: 419 CKKYWSCCNQTIQ 457
           C KYW C N   +
Sbjct: 38  CDKYWKCDNNVAE 50


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +2

Query: 419 CKKYWSCCNQTIQ 457
           C KYW C N   +
Sbjct: 38  CDKYWKCDNNVAE 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,715
Number of Sequences: 336
Number of extensions: 1648
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)