Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G10
         (476 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    71   3e-14
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   5.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   5.5  
AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           22   9.6  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           22   9.6  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           22   9.6  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           22   9.6  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 70.5 bits (165), Expect = 3e-14
 Identities = 32/76 (42%), Positives = 44/76 (57%)
 Frame = +1

Query: 4   KLVVLAFMAPWCGPCKXIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 183
           +LVV+ F A WCGPCK I PKL+E   +                  A++YNI SMPTF+F
Sbjct: 21  QLVVVDFFATWCGPCKVIAPKLEEFQNKYADKIVVVKVDVDECEELAAQYNIASMPTFLF 80

Query: 184 VKNGKKLDEFSGANVD 231
           +K  + + +FSGAN +
Sbjct: 81  IKRKEVVGQFSGANAE 96


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -1

Query: 275 LVSIYLCLRIVVLSLSTLAPE 213
           LVSI +C+ +VVL++   +P+
Sbjct: 316 LVSISICVTVVVLNVHFRSPQ 336


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -1

Query: 275 LVSIYLCLRIVVLSLSTLAPE 213
           LVSI +C+ +VVL++   +P+
Sbjct: 316 LVSISICVTVVVLNVHFRSPQ 336


>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 276 SCTQPPMETKWN 311
           +CT PP + +WN
Sbjct: 85  NCTTPPQKHQWN 96


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 276 SCTQPPMETKWN 311
           +CT PP + +WN
Sbjct: 85  NCTTPPQKHQWN 96


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 276 SCTQPPMETKWN 311
           +CT PP + +WN
Sbjct: 85  NCTTPPQKHQWN 96


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 276 SCTQPPMETKWN 311
           +CT PP + +WN
Sbjct: 85  NCTTPPQKHQWN 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,839
Number of Sequences: 2352
Number of extensions: 7081
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)