Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G09
         (576 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   3.3  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   9.9  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 64   YXIMNVARMPASKNISWSTIEASGLPK-DTSAV 159
            Y ++ +  +    N+SW T E + +PK D +AV
Sbjct: 1016 YLLLVIYSVFNMNNVSWGTREVTVVPKPDPNAV 1048



 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -1

Query: 387 EICPSCRTALIIFIYI 340
           E CP+  +A++IF+ +
Sbjct: 164 ETCPAIGSAILIFVVL 179


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 64   YXIMNVARMPASKNISWSTIEASGLPK-DTSAV 159
            Y ++ +  +    N+SW T E + +PK D +AV
Sbjct: 1016 YLLLVIYSVFNMNNVSWGTREVTVVPKPDPNAV 1048



 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -1

Query: 387 EICPSCRTALIIFIYI 340
           E CP+  +A++IF+ +
Sbjct: 164 ETCPAIGSAILIFVVL 179


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 335 GSYAPTPVTSTNTFGLS*ALFIAVAKA 255
           G+ AP P+TS  T GL   L   V K+
Sbjct: 150 GNDAPPPITSFETSGLRPHLLENVKKS 176


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 370 TTGTDFFSRLVVEWEKAAQVDPPVRL 447
           TTG D  S  +  W++  +++P  +L
Sbjct: 508 TTGVDPDSERMAFWQRILKINPNNKL 533


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,726
Number of Sequences: 336
Number of extensions: 2837
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)