Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G09
         (576 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000989-1|AAH00989.1|  293|Homo sapiens chromosome 14 open read...   159   5e-39
AF226050-1|AAF86950.1|  319|Homo sapiens HCDI protein.                134   3e-31
AK123513-1|BAC85634.1|  198|Homo sapiens protein ( Homo sapiens ...    69   2e-11
AF054839-1|AAC69715.1|  222|Homo sapiens tetraspan TM4SF protein.      33   0.55 
BC032000-1|AAH32000.1|  412|Homo sapiens zinc finger, DHHC-type ...    31   3.8  
AK023215-1|BAB14468.1|  412|Homo sapiens protein ( Homo sapiens ...    31   3.8  

>BC000989-1|AAH00989.1|  293|Homo sapiens chromosome 14 open reading
           frame 124 protein.
          Length = 293

 Score =  159 bits (387), Expect = 5e-39
 Identities = 84/192 (43%), Positives = 112/192 (58%), Gaps = 1/192 (0%)
 Frame = +1

Query: 4   IGGGTGFIGKHLGALLSSKGYXIMNVARMPASKNISWSTIEASGLPKDTSAVVNCAGQQF 183
           +GGGTGFIG  L  LL+++G+ +  V+R P    I+W  + ASGLP    A VN AG+  
Sbjct: 5   VGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGRITWDELAASGLPS-CDAAVNLAGENI 63

Query: 184 MDFTKSWTPGFKQNVQNSRIYTTKALATAINKAQDKPKVFVLVTGVGAYEPSNVNKYDES 363
           ++  + W   F++ V  SR+ TT+ LA AI KA   PK +VLVTGV  Y+PS   +YDE 
Sbjct: 64  LNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDED 123

Query: 364 SPTTGTDFFSRLVVEWEKAAQV-DPPVRLVIIRSGAVLGRWGGMIKNMXXXXXXXXXXXX 540
           SP    DFFS LV +WE AA++     R V++RSG VLGR GG + +M            
Sbjct: 124 SPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPI 183

Query: 541 XDGKQYLPXIHI 576
             G Q+ P IHI
Sbjct: 184 GSGHQFFPWIHI 195


>AF226050-1|AAF86950.1|  319|Homo sapiens HCDI protein.
          Length = 319

 Score =  134 bits (323), Expect = 3e-31
 Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 1/167 (0%)
 Frame = +1

Query: 79  VARMPASKNISWSTIEASGLPKDTSAVVNCAGQQFMDFTKSWTPGFKQNVQNSRIYTTKA 258
           V+R P    I+W  + ASGLP    A VN AG+  ++  + W   F++ V  SR+ TT+ 
Sbjct: 56  VSRKPGPGRITWDELAASGLPS-CDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQL 114

Query: 259 LATAINKAQDKPKVFVLVTGVGAYEPSNVNKYDESSPTTGTDFFSRLVVEWEKAAQV-DP 435
           LA AI KA   PK +VLVTGV  Y+PS   +YDE SP    DFFS LV +WE AA++   
Sbjct: 115 LAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGD 174

Query: 436 PVRLVIIRSGAVLGRWGGMIKNMXXXXXXXXXXXXXDGKQYLPXIHI 576
             R V++RSG VLGR GG + +M              G Q+ P IHI
Sbjct: 175 STRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHI 221


>AK123513-1|BAC85634.1|  198|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41519 fis, clone BRTHA2012392, highly  similar
           to Homo sapiens HCDI (HCDI) mRNA. ).
          Length = 198

 Score = 68.5 bits (160), Expect = 2e-11
 Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = +1

Query: 328 YEPSNVNKYDESSPTTGTDFFSRLVVEWEKAAQV-DPPVRLVIIRSGAVLGRWGGMIKNM 504
           Y+PS   +YDE SP    DFFS LV +WE AA++     R V++RSG VLGR GG + +M
Sbjct: 17  YQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHM 76

Query: 505 XXXXXXXXXXXXXDGKQYLPXIHI 576
                         G Q+ P IHI
Sbjct: 77  LLPFRLGLGVPIGSGHQFFPWIHI 100


>AF054839-1|AAC69715.1|  222|Homo sapiens tetraspan TM4SF protein.
          Length = 222

 Score = 33.5 bits (73), Expect = 0.55
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +3

Query: 36  FRRTAFIKRIXYNERS-SYASLEKYILVNNRGLRLTKRYFGCCQLCW 173
           FR    IK +   ++S  Y  +  Y+LV    L +   +FGCC  CW
Sbjct: 36  FRFGGAIKELSSEDKSPEYFYVGLYVLVGAGALMMAVGFFGCCGPCW 82


>BC032000-1|AAH32000.1|  412|Homo sapiens zinc finger, DHHC-type
           containing 11 protein.
          Length = 412

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -1

Query: 381 CPSCRTALIIFIYI*RFICTNSCN*YKYFWFILSFVYSGSQGFGCVDT*ILYILFE 214
           C SC   +  F +  ++I  N+C   + +WF  S V S + G  C+   +LY+L +
Sbjct: 141 CISCNKCVSGFDHHCKWI--NNCVGSRNYWFFFSTVASATAGMLCLIAILLYVLVQ 194


>AK023215-1|BAB14468.1|  412|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13153 fis, clone NT2RP3003409, weakly similar to
           Human DHHC-domain-containing cysteine-rich protein mRNA.
           ).
          Length = 412

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -1

Query: 381 CPSCRTALIIFIYI*RFICTNSCN*YKYFWFILSFVYSGSQGFGCVDT*ILYILFE 214
           C SC   +  F +  ++I  N+C   + +WF  S V S + G  C+   +LY+L +
Sbjct: 141 CISCNKCVSGFDHHCKWI--NNCVGSRNYWFFFSTVASATAGMLCLIAILLYVLVQ 194


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,172,011
Number of Sequences: 237096
Number of extensions: 1707752
Number of successful extensions: 3603
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3598
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)