Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G09
         (576 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069155-1|AAL39300.1|  302|Drosophila melanogaster GH17516p pro...   165   4e-41
AE013599-1571|AAF58468.2|  302|Drosophila melanogaster CG8768-PA...   165   4e-41
DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 prot...    30   2.6  
BT029561-1|ABL75621.1|  210|Drosophila melanogaster IP16831p pro...    29   6.0  

>AY069155-1|AAL39300.1|  302|Drosophila melanogaster GH17516p
           protein.
          Length = 302

 Score =  165 bits (401), Expect = 4e-41
 Identities = 82/193 (42%), Positives = 116/193 (60%), Gaps = 2/193 (1%)
 Frame = +1

Query: 4   IGGGTGFIGKHLGALLSSKGYXIMNVARMPASKNISWSTIEASGLPKDTSAVVNCAGQQF 183
           IGGGTGFIG++L   L+ KGY +  ++RMP +K I+W  +E +G+P   +AVVN  GQ  
Sbjct: 12  IGGGTGFIGRNLANHLTKKGYDVTVISRMPGAKRITWHELEKNGIPGSVNAVVNATGQNT 71

Query: 184 MDFTKSWTPGFKQNVQNSRIYTTKALATAINKAQDKPKVFVLVTGVGAYEPSNVNKYDES 363
           +D T+ WTPGF+QNV NSRI ++K LA AI K+  +   FV + GV  Y+PS    Y E 
Sbjct: 72  LDPTRRWTPGFQQNVWNSRINSSKTLAQAI-KSAPQVSSFVNLCGVSHYKPSESKVYTEE 130

Query: 364 SPTTGTDFFSRLVVEWEKAAQV--DPPVRLVIIRSGAVLGRWGGMIKNMXXXXXXXXXXX 537
               G D+ SRL + WE+AA    +   +  I+R GAV+G  GGM+++M           
Sbjct: 131 DQVQGFDYMSRLCLAWEEAAHTGSEQDCKTTILRCGAVVGHGGGMVQSMWLPFKFGVGGP 190

Query: 538 XXDGKQYLPXIHI 576
             +G Q +P IH+
Sbjct: 191 LGNGNQIMPWIHL 203


>AE013599-1571|AAF58468.2|  302|Drosophila melanogaster CG8768-PA
           protein.
          Length = 302

 Score =  165 bits (401), Expect = 4e-41
 Identities = 82/193 (42%), Positives = 116/193 (60%), Gaps = 2/193 (1%)
 Frame = +1

Query: 4   IGGGTGFIGKHLGALLSSKGYXIMNVARMPASKNISWSTIEASGLPKDTSAVVNCAGQQF 183
           IGGGTGFIG++L   L+ KGY +  ++RMP +K I+W  +E +G+P   +AVVN  GQ  
Sbjct: 12  IGGGTGFIGRNLANHLTKKGYDVTVISRMPGAKRITWHELEKNGIPGSVNAVVNATGQNT 71

Query: 184 MDFTKSWTPGFKQNVQNSRIYTTKALATAINKAQDKPKVFVLVTGVGAYEPSNVNKYDES 363
           +D T+ WTPGF+QNV NSRI ++K LA AI K+  +   FV + GV  Y+PS    Y E 
Sbjct: 72  LDPTRRWTPGFQQNVWNSRINSSKTLAQAI-KSAPQVSSFVNLCGVSHYKPSESKVYTEE 130

Query: 364 SPTTGTDFFSRLVVEWEKAAQV--DPPVRLVIIRSGAVLGRWGGMIKNMXXXXXXXXXXX 537
               G D+ SRL + WE+AA    +   +  I+R GAV+G  GGM+++M           
Sbjct: 131 DQVQGFDYMSRLCLAWEEAAHTGSEQDCKTTILRCGAVVGHGGGMVQSMWLPFKFGVGGP 190

Query: 538 XXDGKQYLPXIHI 576
             +G Q +P IH+
Sbjct: 191 LGNGNQIMPWIHL 203


>DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 protein.
          Length = 1715

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
 Frame = +1

Query: 172  GQQFMDFTKSWTPGF---KQNVQNSRIYTTKALATAINKAQDKPKVFVLVTGVGAYEPSN 342
            G  F D  K W P F   +++ +NS +     L     K  D  ++      +    PSN
Sbjct: 797  GMVFRDILKIWHPFFVLDRRSKENSYLVVPLILGAGEQKCFDW-ELMTNFRRLPQSHPSN 855

Query: 343  VNKYDESSPTTGTDFFSRLVVEWEKAAQVDPPV 441
            V + ++       DF  ++V +W   A  D P+
Sbjct: 856  VQQREQQPAPRPEDFEGKIVTQW--YANYDKPM 886


>BT029561-1|ABL75621.1|  210|Drosophila melanogaster IP16831p
           protein.
          Length = 210

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +1

Query: 316 GVGAYEP--SNVNKYDESSPTTGTDFFSRLVVEWEKAAQVDP 435
           G GA EP  S     DE +P +  DFF+R  +E ++  Q  P
Sbjct: 140 GAGAGEPTESGYQTIDELTPNSADDFFTRAWLEQQQQQQQLP 181


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,529,650
Number of Sequences: 53049
Number of extensions: 490308
Number of successful extensions: 1292
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)