Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G09
         (576 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21321-8|AAG00045.1|  296|Caenorhabditis elegans Hypothetical pr...    32   0.34 
U23484-16|AAK68297.1|  358|Caenorhabditis elegans Hypothetical p...    30   1.0  
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z48334-7|CAB54223.2|  608|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U28731-6|AAA68295.1|  160|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>U21321-8|AAG00045.1|  296|Caenorhabditis elegans Hypothetical
           protein ZK177.2 protein.
          Length = 296

 Score = 31.9 bits (69), Expect = 0.34
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
 Frame = +1

Query: 70  IMNVARMPASKNISWSTIEASGLPKDTSAVVNCAGQQFMDFTKSWTPGFKQNVQNSRIYT 249
           +MN+   P +K      I+   +   T  ++     Q +DF+KSW     +    SR++T
Sbjct: 191 MMNILIAPTTKRWIEYNIDGKTITIQTFGII----PQLIDFSKSWCGADPERHDISRLHT 246

Query: 250 -TKALATAIN-KAQDKPKVFVLVTGVGA 327
             K +  ++N   +DK KV   V  VGA
Sbjct: 247 VAKRVGHSLNGSKRDKKKVRQAVKMVGA 274


>U23484-16|AAK68297.1|  358|Caenorhabditis elegans Hypothetical
           protein EEED8.15 protein.
          Length = 358

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +1

Query: 307 LVTGV-GAYEPSNVNKYDESSPTTGTDFFSRL 399
           + TG+ GA+  S +NKY+E+  T G  F +RL
Sbjct: 209 IATGICGAWRLSEINKYNETLKTRGVSFPNRL 240


>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
           protein E01G6.1 protein.
          Length = 1391

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 13/54 (24%), Positives = 24/54 (44%)
 Frame = -2

Query: 233 FCTFCLNPGVQDLVKSMNCCPAQLTTAEVSFGKPEASIVDQDIFFEAGIRATFI 72
           +C     P  +     +NC   ++T  E++ GKP + ++  D    AG   T +
Sbjct: 57  YCCQNPTPTAKSSTDKINCGEGRVTYIEMATGKPRSCVLTGDNSCPAGFGCTLV 110


>Z48334-7|CAB54223.2|  608|Caenorhabditis elegans Hypothetical
           protein F10B5.8 protein.
          Length = 608

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 203 QDLVKSMNCCPAQLTTAEVSFGK 135
           +DL+K  NC P  L+ +E+  GK
Sbjct: 504 EDLIKDKNCMPITLSLSEIIKGK 526


>U28731-6|AAA68295.1|  160|Caenorhabditis elegans Hypothetical
           protein F12A10.2 protein.
          Length = 160

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +1

Query: 70  IMNVARMPASKNISWSTIEASGLPKDTSAVVNCAGQQFMDFTKSWTPGFKQNVQNSRIYT 249
           +MN+   P +K      I+   +   T  ++     Q +DF+KSW     +    S+++T
Sbjct: 51  MMNILIAPTTKRWIEYNIDGKTITIQTFGII----PQLIDFSKSWCGADPERHDISKLHT 106

Query: 250 -TKALATAINKAQDKPKV 300
             K + T +N ++   +V
Sbjct: 107 VAKRIVTNLNGSKKDKEV 124


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,723,784
Number of Sequences: 27780
Number of extensions: 263721
Number of successful extensions: 674
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)