Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G08
         (822 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B40B2 Cluster: PREDICTED: similar to THAP domai...    35   2.8  
UniRef50_Q23GD2 Cluster: Cyclic nucleotide-binding domain contai...    34   3.7  
UniRef50_Q4Z4X3 Cluster: Putative uncharacterized protein; n=2; ...    33   8.6  

>UniRef50_UPI00015B40B2 Cluster: PREDICTED: similar to THAP domain
           containing 4; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to THAP domain containing 4 - Nasonia
           vitripennis
          Length = 202

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 553 KNFRFPKEPNAREQWIDVTGRGNWRQRR 636
           K FRFP     R+QW+D   R NW+ ++
Sbjct: 12  KRFRFPSSDVKRKQWLDAIRRPNWKPKK 39


>UniRef50_Q23GD2 Cluster: Cyclic nucleotide-binding domain
           containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: Cyclic nucleotide-binding domain containing
           protein - Tetrahymena thermophila SB210
          Length = 1058

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
 Frame = +2

Query: 524 KMLFDLCSKLKILGFLKNLTP-GNNGLT*Q---VEETGDKDEYYLL*TFTENDFIIKKIR 691
           K  F + SK  I+ FL+ LTP G N        V+  GDK        FTE +  IK + 
Sbjct: 183 KKNFMMNSKKNIMYFLQKLTPFGRNRYFKSKRIVKIIGDKSYVIQKNAFTEGEHSIKSLF 242

Query: 692 IHLVLKNSFAINSKRQLLNKYVLFQRQ*LFVINKSKIVFF 811
              V K    +NS+  L+N    F    L V +   +VF+
Sbjct: 243 CRTVAKIIQLLNSRSLLINPINQFYLAILSVFSCFNVVFY 282


>UniRef50_Q4Z4X3 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 661

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
 Frame = +2

Query: 590 NNGLT*QVEETGDKDEYYLL*TFTENDFIIKKIRIHLVLKNSFAINSKRQLL-NKYVL-- 760
           NN    +  +  + D+YYL+      + I KK  I L++   F +N ++ +L   Y+L  
Sbjct: 103 NNANIHETNKRSNIDKYYLVKNIFNENVITKKGNIQLMINKYFYVNEEKFVLYENYLLNK 162

Query: 761 FQRQ*LFVINKSKIVFFFXY 820
           ++++ L+   ++K++ F  Y
Sbjct: 163 YKKKYLYEDKETKLINFSLY 182


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,741,033
Number of Sequences: 1657284
Number of extensions: 12775716
Number of successful extensions: 26886
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26879
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 70914189703
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)