Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G08
         (822 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    27   0.28 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.0  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   7.9  

>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 26.6 bits (56), Expect = 0.28
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = -1

Query: 747 LSSWRLLL---IANEFFKTKCILIFFMIKSFSVNV 652
           L   RLLL   I N+ F+T C L+ F  +SFS N+
Sbjct: 59  LQKLRLLLQGNINNQLFQTPCELLNFPKRSFSENM 93


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 708 KIHSQLIASANCLTNTF 758
           K+  QL+ S NCL  +F
Sbjct: 415 KVAKQLVNSVNCLRESF 431


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 708 KIHSQLIASANCLTNTF 758
           K+  QL+ S NCL  +F
Sbjct: 453 KVAKQLVNSVNCLRESF 469


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 292 VDDFTTWSPHYRQTARPIRAKAEISKIEV*RTQ 194
           V DF +W P +RQ    ++   ++S +EV R +
Sbjct: 141 VIDFESWRPIFRQNWASLQPYKKLS-VEVVRRE 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,259
Number of Sequences: 438
Number of extensions: 4100
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)