Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G04
         (816 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L76687-1|AAC15861.1|  540|Homo sapiens Grb14 protein.                  32   2.9  
BC053559-1|AAH53559.1|  540|Homo sapiens growth factor receptor-...    32   2.9  
AC107075-1|AAY14768.1|  368|Homo sapiens unknown protein.              32   2.9  

>L76687-1|AAC15861.1|  540|Homo sapiens Grb14 protein.
          Length = 540

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
 Frame = +3

Query: 96  KRNFTHEHSWSLFSY-DIDGVKYTNDSDYEYKDGAFTFRNVALEEHEKFLIRQNLIPYDF 272
           K ++  +HSW+LF +    GV+ T + D+E      +  N  +EE  K   R+N   Y+F
Sbjct: 140 KNHYIDDHSWTLFEHLPHIGVERTIE-DHELVIEVLS--NWGIEEENKLYFRKNYAKYEF 196

Query: 273 ----IYDVPRITISIPRTRPGIPFTVNFIDRFLDEEV-PMLRPFPNSNE-GKE 413
               +Y  P   +S      G       +  FL     P +  F ++ E GK+
Sbjct: 197 FKNPMYFFPEHMVSFATETNGEISPTQILQMFLSSSTYPEIHGFLHAKEQGKK 249


>BC053559-1|AAH53559.1|  540|Homo sapiens growth factor
           receptor-bound protein 14 protein.
          Length = 540

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
 Frame = +3

Query: 96  KRNFTHEHSWSLFSY-DIDGVKYTNDSDYEYKDGAFTFRNVALEEHEKFLIRQNLIPYDF 272
           K ++  +HSW+LF +    GV+ T + D+E      +  N  +EE  K   R+N   Y+F
Sbjct: 140 KNHYIDDHSWTLFEHLPHIGVERTIE-DHELVIEVLS--NWGIEEENKLYFRKNYAKYEF 196

Query: 273 ----IYDVPRITISIPRTRPGIPFTVNFIDRFLDEEV-PMLRPFPNSNE-GKE 413
               +Y  P   +S      G       +  FL     P +  F ++ E GK+
Sbjct: 197 FKNPMYFFPEHMVSFATETNGEISPTQILQMFLSSSTYPEIHGFLHAKEQGKK 249


>AC107075-1|AAY14768.1|  368|Homo sapiens unknown protein.
          Length = 368

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
 Frame = +3

Query: 96  KRNFTHEHSWSLFSY-DIDGVKYTNDSDYEYKDGAFTFRNVALEEHEKFLIRQNLIPYDF 272
           K ++  +HSW+LF +    GV+ T + D+E      +  N  +EE  K   R+N   Y+F
Sbjct: 140 KNHYIDDHSWTLFEHLPHIGVERTIE-DHELVIEVLS--NWGIEEENKLYFRKNYAKYEF 196

Query: 273 ----IYDVPRITISIPRTRPGIPFTVNFIDRFLDEEV-PMLRPFPNSNE-GKE 413
               +Y  P   +S      G       +  FL     P +  F ++ E GK+
Sbjct: 197 FKNPMYFFPEHMVSFATETNGEISPTQILQMFLSSSTYPEIHGFLHAKEQGKK 249


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,783,878
Number of Sequences: 237096
Number of extensions: 2078300
Number of successful extensions: 3503
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3500
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)