Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G04
         (816 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098995-4|AAC67484.2|  301|Caenorhabditis elegans Hypothetical ...    33   0.32 
Z81075-2|CAB03048.1|  368|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p...    29   4.0  
Z78411-4|CAB01645.2|  370|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical pr...    28   9.2  
AF003134-2|AAB54141.5|  691|Caenorhabditis elegans Hypothetical ...    28   9.2  

>AF098995-4|AAC67484.2|  301|Caenorhabditis elegans Hypothetical
           protein F58E1.7 protein.
          Length = 301

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 25/102 (24%), Positives = 41/102 (40%)
 Frame = +3

Query: 144 IDGVKYTNDSDYEYKDGAFTFRNVALEEHEKFLIRQNLIPYDFIYDVPRITISIPRTRPG 323
           I+G+  TN   +++ D   TF NV L      +   NL    F+ +V +I      TR  
Sbjct: 41  INGLHLTN---HQFPDNLSTFSNVYLINGNVEISNTNLTSLAFLANVTKIVTPNMPTRRE 97

Query: 324 IPFTVNFIDRFLDEEVPMLRPFPNSNEGKEFTSVFNMFEDSC 449
           +   +          +P+L    NS  G    ++ N+  D C
Sbjct: 98  VAVNIRENSEMTHLGMPLLESISNSLLGPVIMNLENLHPDFC 139


>Z81075-2|CAB03048.1|  368|Caenorhabditis elegans Hypothetical
           protein F35C12.3a protein.
          Length = 368

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 21/68 (30%), Positives = 30/68 (44%)
 Frame = +3

Query: 198 FTFRNVALEEHEKFLIRQNLIPYDFIYDVPRITISIPRTRPGIPFTVNFIDRFLDEEVPM 377
           F F+   LE+H++ L          IY   R+   IP T    PF  +F +R  D ++ M
Sbjct: 85  FDFQEETLEKHDEELTD--------IYHT-RMNFPIPTTNQRFPFKAHFFERINDIDLNM 135

Query: 378 LRPFPNSN 401
               PN N
Sbjct: 136 AHIIPNLN 143


>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
            H05L14.2 protein.
          Length = 2162

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +3

Query: 312  TRPGIPFTVNFIDRFLDEEVPMLRPFPNSN--EGKEFTSVFNMFEDSCSRLWFVDTGYL 482
            +RP +    NF +RF  E +P + PF +      + F S+  + +D+C  L  +D  YL
Sbjct: 1460 SRPAVDGVENFYERFEKEILPEVLPFISGRFISIRTFVSIVEVVKDNC--LDAIDLYYL 1516


>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
            protein H05L14.2 protein.
          Length = 2162

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +3

Query: 312  TRPGIPFTVNFIDRFLDEEVPMLRPFPNSN--EGKEFTSVFNMFEDSCSRLWFVDTGYL 482
            +RP +    NF +RF  E +P + PF +      + F S+  + +D+C  L  +D  YL
Sbjct: 1460 SRPAVDGVENFYERFEKEILPEVLPFISGRFISIRTFVSIVEVVKDNC--LDAIDLYYL 1516


>Z78411-4|CAB01645.2|  370|Caenorhabditis elegans Hypothetical
           protein F02D8.3 protein.
          Length = 370

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 390 PNSNEGKEFTSVFNMFEDSCSRLWFVDTGYLDIPGVRKQ 506
           P S+     +S FN++ +S   LW   TG +DI   +KQ
Sbjct: 281 PASDNFMGASSPFNLWRESFISLWPQKTGTIDIEDTKKQ 319


>U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical
           protein K06A9.1c protein.
          Length = 825

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -3

Query: 496 TPGISRYPVSTNQSLEQLSSNMLKTDVNSLPSFELGNGLSIGTSSS 359
           T GIS  P +T+ S    S + L T  + LPS    + L I +SS+
Sbjct: 7   TAGISSSPAATSPSTAVTSPSSLGTSSSPLPSSISTSALPIASSSA 52


>AF003134-2|AAB54141.5|  691|Caenorhabditis elegans Hypothetical
           protein ZC581.3 protein.
          Length = 691

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/26 (53%), Positives = 20/26 (76%), Gaps = 3/26 (11%)
 Frame = -2

Query: 479 VSCINK-PKS-RTAVF-KHVKNRCKF 411
           + C+ K PKS + A+F KHV+N+CKF
Sbjct: 69  LDCMKKCPKSEKHAIFAKHVRNKCKF 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,300,987
Number of Sequences: 27780
Number of extensions: 356126
Number of successful extensions: 879
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)