Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_G03
         (841 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc...    28   1.9  
SPBC106.11c |plg7||phospholipase A2 |Schizosaccharomyces pombe|c...    27   2.5  
SPCC584.16c |||sequence orphan|Schizosaccharomyces pombe|chr 3||...    27   3.3  
SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces p...    27   3.3  
SPBC83.10 |||conserved eukaryotic protein|Schizosaccharomyces po...    27   4.4  
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S...    26   7.6  

>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 630

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = -3

Query: 614 VFRYIRLNSPGFVIIKMYIAEWRWKRVGHYSTRAIEGEPVSMVAGSEINLYVRFAFI*FR 435
           + + +R  +P    +   + + +W  +GH ++  ++ +PV  V+ S              
Sbjct: 394 IMQQVRPETPNSPRLNSTVIQSKWDSLGHTASPKMQTQPVRSVSQSSATTETNVKPTKEE 453

Query: 434 EVEVPVGRP-YLQTIL 390
             +VPV  P YL+ ++
Sbjct: 454 NADVPVSSPDYLKDLV 469


>SPBC106.11c |plg7||phospholipase A2 |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 438

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 678 MSHSNVKSSVMYPYYQLPVDKLHV 749
           M H+  K S++Y  + LPV +LH+
Sbjct: 279 MFHTEFKCSILYDIWMLPVRQLHL 302


>SPCC584.16c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 231

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 752 RHIGHARVVL*VYGLEIKFHLMW 820
           RH+G ++VV+ +Y   IK +L W
Sbjct: 102 RHVGSSQVVIKIYSPHIKDYLPW 124


>SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 612

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 329 HLQTPEWFKYNEQGSHRKASREWFGG 406
           HL +    KYN   +HR AS  W+ G
Sbjct: 141 HLSSSSLSKYNHHSNHRLASPGWWYG 166


>SPBC83.10 |||conserved eukaryotic protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 189

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +3

Query: 639 FAVAVHEIGHSLGMSHSNVKSSVMYPYYQLPVDK 740
           + + +  I +     H  +  S++YPYY  P +K
Sbjct: 77  YFLRLESIDYEFSEFHIIINESIVYPYYTSPAEK 110


>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
           Mde10|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 512

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 645 VAVHEIGHSLGMSHSNVKSS 704
           V  HEIGH LG+ H   K S
Sbjct: 226 VVAHEIGHILGLIHDCNKKS 245


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,425,399
Number of Sequences: 5004
Number of extensions: 72670
Number of successful extensions: 212
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)