Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_G03
(841 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical ... 138 6e-33
AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix metall... 138 6e-33
U41266-1|AAM48565.1| 521|Caenorhabditis elegans Zinc metallopro... 99 2e-21
AB007817-1|BAA28353.1| 521|Caenorhabditis elegans matrix metall... 99 2e-21
AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical ... 96 2e-20
AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical ... 90 2e-18
AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix metall... 87 1e-17
U00038-1|AAA50663.2| 279|Caenorhabditis elegans Hypothetical pr... 84 1e-16
AF099191-1|AAF78096.1| 279|Caenorhabditis elegans MMP-like prot... 84 1e-16
Z95309-1|CAB08559.2| 446|Caenorhabditis elegans Hypothetical pr... 69 4e-12
Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical pr... 61 8e-10
Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical pr... 32 0.58
Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical pr... 29 3.1
U41014-3|AAK32948.1| 519|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z74039-2|CAA98501.1| 448|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 28 7.2
>AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical
protein C31B8.8 protein.
Length = 579
Score = 138 bits (333), Expect = 6e-33
Identities = 77/221 (34%), Positives = 113/221 (51%), Gaps = 9/221 (4%)
Frame = +3
Query: 144 QSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKDIDEDSHARNRRYIIQEGWNKR 323
Q A++K Q FAG+ +TG LD TK RCG+ D + + ++ W+K
Sbjct: 88 QVFKSAIRKFQEFAGIAKTGFLDAATKAKMALSRCGVTDAPLALTSGSSQF----KWSKT 143
Query: 324 EVTYRLLNGSSTMSKDRIERLLENGLEVWAPHGNLHFTKLDEGK-ADIQVYFASGNHGDG 500
+TY + + SS +SKD + R + +W+ L F+++ G +DI++ F NH D
Sbjct: 144 RLTYSIESWSSDLSKDDVRRAISEAYGLWSKVTPLEFSEVPAGSTSDIKIRFGVRNHNDP 203
Query: 501 FPFDGPGRVVAHAFPPPLGDIHFDDDETWGVXXXXXXXXXXXXXXFFAVAVHEIGHSLGM 680
+PFDG G V+AHA P G HFDDDE W AVA+HE GH+LG+
Sbjct: 204 WPFDGEGGVLAHATMPESGMFHFDDDENW-TYKDARKIHNNEATDLLAVAIHEGGHTLGL 262
Query: 681 SHSNVKSSVMYPYYQLPVD--------KLHVDDILGMQELY 779
HS ++++M P+YQ D L DDI +Q +Y
Sbjct: 263 EHSRDENAIMAPFYQKTTDSSGNYVYPNLKSDDISAIQAIY 303
>AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 579
Score = 138 bits (333), Expect = 6e-33
Identities = 77/221 (34%), Positives = 113/221 (51%), Gaps = 9/221 (4%)
Frame = +3
Query: 144 QSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKDIDEDSHARNRRYIIQEGWNKR 323
Q A++K Q FAG+ +TG LD TK RCG+ D + + ++ W+K
Sbjct: 88 QVFKSAIRKFQEFAGIAKTGFLDAATKAKMALSRCGVTDAPLALTSGSSQF----KWSKT 143
Query: 324 EVTYRLLNGSSTMSKDRIERLLENGLEVWAPHGNLHFTKLDEGK-ADIQVYFASGNHGDG 500
+TY + + SS +SKD + R + +W+ L F+++ G +DI++ F NH D
Sbjct: 144 RLTYSIESWSSDLSKDDVRRAISEAYGLWSKVTPLEFSEVPAGSTSDIKIRFGVRNHNDP 203
Query: 501 FPFDGPGRVVAHAFPPPLGDIHFDDDETWGVXXXXXXXXXXXXXXFFAVAVHEIGHSLGM 680
+PFDG G V+AHA P G HFDDDE W AVA+HE GH+LG+
Sbjct: 204 WPFDGEGGVLAHATMPESGMFHFDDDENW-TYKDARKIHNNEATDLLAVAIHEGGHTLGL 262
Query: 681 SHSNVKSSVMYPYYQLPVD--------KLHVDDILGMQELY 779
HS ++++M P+YQ D L DDI +Q +Y
Sbjct: 263 EHSRDENAIMAPFYQKTTDSSGNYVYPNLKSDDISAIQAIY 303
>U41266-1|AAM48565.1| 521|Caenorhabditis elegans Zinc
metalloprotease protein 1 protein.
Length = 521
Score = 99 bits (238), Expect = 2e-21
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 4/217 (1%)
Frame = +3
Query: 81 FLLQYGYLSKXLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKD 260
FL +YGYL+ +S+S+S+A+K MQ AGL +TG LD T Q+ +R RCG D
Sbjct: 29 FLQKYGYLTSG----DNQLSSESLSDALKNMQRMAGLEETGELDERTIQMMERPRCGHPD 84
Query: 261 IDEDSHARNRRYI-IQEGWNKREVTY--RLLNGSSTMSKDRIERLLENGLEVWAPHGNLH 431
+++ +R +RY Q W ++ +TY + + S+ +S D + R + W+ ++
Sbjct: 85 VEDHQKSRGKRYAPPQFKWKEKIITYGCKAVGTSTRISLDDLRRTMHQAASQWSELADVE 144
Query: 432 FTKLDEGKADIQVYFASGNHGD-GFPFDGPGRVVAHAFPPPLGDIHFDDDETWGVXXXXX 608
+ + + NH FD + +AHAF P G IH +D + +
Sbjct: 145 IVESSVKNPMMVISAGRENHYPCTVRFD--TKTLAHAFFPTNGQIHINDRVQFAM---TN 199
Query: 609 XXXXXXXXXFFAVAVHEIGHSLGMSHSNVKSSVMYPY 719
++V HE+GH+LG SHS SVM+ Y
Sbjct: 200 YTERMGANSLYSVVAHEMGHALGFSHSPDIDSVMFAY 236
>AB007817-1|BAA28353.1| 521|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 521
Score = 99 bits (238), Expect = 2e-21
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 4/217 (1%)
Frame = +3
Query: 81 FLLQYGYLSKXLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKD 260
FL +YGYL+ +S+S+S+A+K MQ AGL +TG LD T Q+ +R RCG D
Sbjct: 29 FLQKYGYLTSG----DNQLSSESLSDALKNMQRMAGLEETGELDERTIQMMERPRCGHPD 84
Query: 261 IDEDSHARNRRYI-IQEGWNKREVTY--RLLNGSSTMSKDRIERLLENGLEVWAPHGNLH 431
+++ +R +RY Q W ++ +TY + + S+ +S D + R + W+ ++
Sbjct: 85 VEDHQKSRGKRYAPPQFKWKEKIITYGCKAVGTSTRISLDDLRRTMHQAASQWSELADVE 144
Query: 432 FTKLDEGKADIQVYFASGNHGD-GFPFDGPGRVVAHAFPPPLGDIHFDDDETWGVXXXXX 608
+ + + NH FD + +AHAF P G IH +D + +
Sbjct: 145 IVESSVKNPMMVISAGRENHYPCTVRFD--TKTLAHAFFPTNGQIHINDRVQFAM---TN 199
Query: 609 XXXXXXXXXFFAVAVHEIGHSLGMSHSNVKSSVMYPY 719
++V HE+GH+LG SHS SVM+ Y
Sbjct: 200 YTERMGANSLYSVVAHEMGHALGFSHSPDIDSVMFAY 236
>AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical
protein H19M22.3a protein.
Length = 519
Score = 96.3 bits (229), Expect = 2e-20
Identities = 72/252 (28%), Positives = 121/252 (48%), Gaps = 31/252 (12%)
Frame = +3
Query: 90 QYGYLSKXLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKDIDE 269
+YGYL G+ ++ + Q +A+ Q + QTG +D T + + RC D+ +
Sbjct: 64 KYGYLK----GIDHS-SPQEFRQALMFFQEVLEVEQTGNVDEMTVEAASKPRCTQTDVRQ 118
Query: 270 DSHARNRRYIIQEG--W---NKREVTYRLLNGSSTMSKDRIE--RLLENGLEVWAPHGNL 428
+ R +R+ + + W + + VT + T DR+E +++E ++W+ +
Sbjct: 119 EQTKRTKRFTLSKRAKWAHASGQSVTLKWYISDYTSDIDRLETRKVVEKAFKLWSSQSYI 178
Query: 429 HFTKL---------DEGKADIQVYFASGNHGDGFPFDGPG---------RVVAHAFPP-- 548
K + +ADI + +A GNHGD FDG V+AH F P
Sbjct: 179 KNEKKVTLTFQEASSKDEADINILWAEGNHGDEHDFDGANGKIEGNKKENVLAHTFFPGY 238
Query: 549 --PL-GDIHFDDDETWGVXXXXXXXXXXXXXXFFAVAVHEIGHSLGMSHSNVKSSVMYPY 719
PL GDIHFDD E W + + +A HEIGH+LG+ HS ++M+PY
Sbjct: 239 ARPLNGDIHFDDAEDWEIDVDQVGHGSNKRFFPYVLA-HEIGHALGLDHSQKADALMHPY 297
Query: 720 YQ-LPVDKLHVD 752
Y+ +P++++ +D
Sbjct: 298 YKNVPINEIQLD 309
>AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical
protein H19M22.3c protein.
Length = 453
Score = 90.2 bits (214), Expect = 2e-18
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 31/217 (14%)
Frame = +3
Query: 195 QTGVLDVPTKQLFKRKRCGLKDIDEDSHARNRRYIIQEG--W---NKREVTYRLLNGSST 359
QTG +D T + + RC D+ ++ R +R+ + + W + + VT + T
Sbjct: 62 QTGNVDEMTVEAASKPRCTQTDVRQEQTKRTKRFTLSKRAKWAHASGQSVTLKWYISDYT 121
Query: 360 MSKDRIE--RLLENGLEVWAPHGNLHFTKL---------DEGKADIQVYFASGNHGDGFP 506
DR+E +++E ++W+ + K + +ADI + +A GNHGD
Sbjct: 122 SDIDRLETRKVVEKAFKLWSSQSYIKNEKKVTLTFQEASSKDEADINILWAEGNHGDEHD 181
Query: 507 FDGPG---------RVVAHAFPP----PL-GDIHFDDDETWGVXXXXXXXXXXXXXXFFA 644
FDG V+AH F P PL GDIHFDD E W + +
Sbjct: 182 FDGANGKIEGNKKENVLAHTFFPGYARPLNGDIHFDDAEDWEIDVDQVGHGSNKRFFPYV 241
Query: 645 VAVHEIGHSLGMSHSNVKSSVMYPYYQ-LPVDKLHVD 752
+A HEIGH+LG+ HS ++M+PYY+ +P++++ +D
Sbjct: 242 LA-HEIGHALGLDHSQKADALMHPYYKNVPINEIQLD 277
>AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 394
Score = 87.4 bits (207), Expect = 1e-17
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 31/217 (14%)
Frame = +3
Query: 195 QTGVLDVPTKQLFKRKRCGLKDIDEDSHARNRRY----IIQEGWNK-REVTYRLLNGSST 359
QTG +D T + + RC D+ ++ R +R+ Q G + VT + T
Sbjct: 3 QTGNVDEMTVEAASKPRCTQTDVRQEQTKRTKRFSSLKTSQVGARSGQSVTLKWYISDYT 62
Query: 360 MSKDRIE--RLLENGLEVWAPHGNLHFTKL---------DEGKADIQVYFASGNHGDGFP 506
DR+E +++E ++W+ + K + +ADI + +A GNHGD
Sbjct: 63 SDIDRLETRKVVEKAFKLWSSQSYIKNEKKVTLTFQEASSKDEADINILWAEGNHGDEHD 122
Query: 507 FDGPG---------RVVAHAFPP----PL-GDIHFDDDETWGVXXXXXXXXXXXXXXFFA 644
FDG V+AH F P PL GDIHFDD E W + +
Sbjct: 123 FDGANGKIEGNKKENVLAHTFFPGYARPLNGDIHFDDAEDWEIDVDQVGHGSNKRFFPYV 182
Query: 645 VAVHEIGHSLGMSHSNVKSSVMYPYYQ-LPVDKLHVD 752
+A HEIGH+LG+ HS ++M+PYY+ +P++++ +D
Sbjct: 183 LA-HEIGHALGLDHSQKADALMHPYYKNVPINEIQLD 218
>U00038-1|AAA50663.2| 279|Caenorhabditis elegans Hypothetical
protein T21D11.1 protein.
Length = 279
Score = 83.8 bits (198), Expect = 1e-16
Identities = 56/179 (31%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Frame = +3
Query: 279 ARNRRYIIQ-EGWNKREVTYRLLNGSSTMSKDR--IERLLENGLEVWAPHGNLHFTKLD- 446
+R +RY+I+ + W K +T++L + + D + + W+ ++ F ++
Sbjct: 37 SREKRYVIRAKRWKKHTLTWQLQT-QNLLDPDVFIVRNTMHRAFNEWSTVSSVDFREIPP 95
Query: 447 ----EGKADIQVYFASGNHGDGFPFDGPGRVVAHAFPPPLGDIHFDDDETWGVXXXXXXX 614
+ DI + F G H DGFPFDG VVAHAF P G +HFD +E W +
Sbjct: 96 DLVTKQPPDIYIAFEKGEHSDGFPFDGQDGVVAHAFYPRDGRLHFDAEEQWSL------- 148
Query: 615 XXXXXXXFFAVAVHEIGHSLGMSHSNVKSSVMY----PYYQLPVDKLHVDDILGMQELY 779
F AVHEIGH LG+ HS + M+ PY P L DD+ ++ L+
Sbjct: 149 NSVEGVNLFQTAVHEIGHLLGLEHSMDVRAAMFAAKRPYD--PAFTLGDDDVRAIRSLF 205
>AF099191-1|AAF78096.1| 279|Caenorhabditis elegans MMP-like protein
protein.
Length = 279
Score = 83.8 bits (198), Expect = 1e-16
Identities = 56/179 (31%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Frame = +3
Query: 279 ARNRRYIIQ-EGWNKREVTYRLLNGSSTMSKDR--IERLLENGLEVWAPHGNLHFTKLD- 446
+R +RY+I+ + W K +T++L + + D + + W+ ++ F ++
Sbjct: 37 SREKRYVIRAKRWKKHTLTWQLQT-QNLLDPDVFIVRNTMHRAFNEWSTVSSVDFREIPP 95
Query: 447 ----EGKADIQVYFASGNHGDGFPFDGPGRVVAHAFPPPLGDIHFDDDETWGVXXXXXXX 614
+ DI + F G H DGFPFDG VVAHAF P G +HFD +E W +
Sbjct: 96 DLVTKQPPDIYIAFEKGEHSDGFPFDGQDGVVAHAFYPRDGRLHFDAEEQWSL------- 148
Query: 615 XXXXXXXFFAVAVHEIGHSLGMSHSNVKSSVMY----PYYQLPVDKLHVDDILGMQELY 779
F AVHEIGH LG+ HS + M+ PY P L DD+ ++ L+
Sbjct: 149 NSVEGVNLFQTAVHEIGHLLGLEHSMDVRAAMFAAKRPYD--PAFTLGDDDVRAIRSLF 205
>Z95309-1|CAB08559.2| 446|Caenorhabditis elegans Hypothetical
protein H36L18.1 protein.
Length = 446
Score = 68.9 bits (161), Expect = 4e-12
Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +3
Query: 444 DEGKADIQVYFASGNHGDGFPFDGPGRVVAHAFPPPL-GDIHFDDDETW 587
DE KA+I + FA+G+H DG PFDG G ++AHAF P GD+HFD+DE W
Sbjct: 21 DEQKANIDIVFAAGDHEDGEPFDGKGNILAHAFFPRYGGDVHFDEDELW 69
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Frame = +3
Query: 639 FAVAVHEIGHSLGMSHSNVKSSVMYPYYQL---PVDKLHVDDILGMQELY 779
+AVAVHEIGHSLG+ HS+ S+M P+Y+ V LH DDI ++ LY
Sbjct: 112 YAVAVHEIGHSLGLKHSSNHLSIMAPFYKQYTGAVMHLHQDDISAVKRLY 161
>Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical
protein W09D12.1 protein.
Length = 472
Score = 61.3 bits (142), Expect = 8e-10
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 6/220 (2%)
Frame = +3
Query: 138 TSQSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKDIDEDSHARNRRYIIQEGWN 317
+ + +A+ + Q+ +G +DVPT+ RC D+D+ +E W
Sbjct: 62 SEKQTKDALIRFQSAFLYYSSGDVDVPTQAKMNEWRCANNDMDKGQPIPPASK--KELWT 119
Query: 318 KREVTYRLLNGSSTMSKDRIERLLENGLEVWAPHGNLHFTKLDEGKADIQVYFASGNHGD 497
K+ +TY+++N +T+S+ +I E W F + DI + F +
Sbjct: 120 KKSLTYKVVNTPNTLSQAQIRSAAHEAFEQWTRASGFKFVETTGATPDITITFYDVPQSN 179
Query: 498 GFPFDGPGRVVAHAFPPPLGDIHFDDDETWGVXXXXXXXXXXXXXXFFAVAVHEIGHSLG 677
R+ A P I D ++ W + +HEIGH LG
Sbjct: 180 -------LRIAGSASKPVNSHIILDKNQEWA-----YKSQAPMGISLYHTLLHEIGHILG 227
Query: 678 MSHSNVKSSVMYPYYQ---LP---VDKLHVDDILGMQELY 779
+ H+ + S+M+P ++ LP VD + D L ++++Y
Sbjct: 228 LPHTFYRGSIMHPIFKPVLLPHGTVDTVPNVDRLAIRKIY 267
>Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical
protein F14B6.2 protein.
Length = 720
Score = 31.9 bits (69), Expect = 0.58
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +3
Query: 150 ISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKDIDEDSHARNRRYIIQEGWNKREV 329
+SE+ + M L T L T + K+ G+K++ +++H R+++ +++E + +
Sbjct: 404 LSESTRMMWDMDELKYTTFLAPKTTEQTKQVEEGVKEVIQEAHERSQKPMLKETFEEATT 463
Query: 330 -TYRLLNGSSTMSKDRIERLLENGLEVWAP 416
T + L G MSKD+ E+ E E + P
Sbjct: 464 STEKPLPGG--MSKDQWEKKKE-AFEAYTP 490
>Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical
protein T11F9.3 protein.
Length = 379
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 639 FAVAVHEIGHSLGMSHSNVKS 701
F AVHEI H+LG++H +S
Sbjct: 114 FGTAVHEIMHALGIAHGQARS 134
>U41014-3|AAK32948.1| 519|Caenorhabditis elegans Hypothetical
protein C06G1.1 protein.
Length = 519
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 452 QSGHTSLFRFRQPWRRVPLRWPWSSSGPRVSTATRRYT 565
+ G T L FR P+R PL+ P + SG + YT
Sbjct: 259 RQGRTRLNDFRLPYRSPPLQVPTADSGHMIDFYLSNYT 296
>Z74039-2|CAA98501.1| 448|Caenorhabditis elegans Hypothetical
protein K03B8.2 protein.
Length = 448
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 639 FAVAVHEIGHSLGMSHSN 692
F AVHEI HSLG+ H++
Sbjct: 166 FGTAVHEIMHSLGLFHTH 183
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical protein
F59F5.6 protein.
Length = 1139
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = +3
Query: 48 FQNIXSQTWVNFLLQYGYLSKXLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDVPTKQ 227
+ N Q WV + G S+ L G ++ E AFA Q G DVP +Q
Sbjct: 1040 WSNERVQRWVEEI-GLGVFSRNLVDSGIHGALIALDETFDA-SAFAYALQIGSQDVPNRQ 1097
Query: 228 LFKRKRCGL 254
L ++K GL
Sbjct: 1098 LLEKKFIGL 1106
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = +3
Query: 48 FQNIXSQTWVNFLLQYGYLSKXLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDVPTKQ 227
+ N Q WV + G S+ L G ++ E AFA Q G DVP +Q
Sbjct: 1040 WSNERVQRWVEEI-GLGVFSRNLVDSGIHGALIALDETFDA-SAFAYALQIGSQDVPNRQ 1097
Query: 228 LFKRKRCGL 254
L ++K GL
Sbjct: 1098 LLEKKFIGL 1106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,059,971
Number of Sequences: 27780
Number of extensions: 420458
Number of successful extensions: 1074
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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