Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_G01
(546 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC343.20 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 31 0.11
SPCC4B3.11c |||conserved eukaryotic protein|Schizosaccharomyces ... 29 0.45
SPCC16C4.03 |pin1||peptidyl-prolyl cis-trans isomerase Pin1|Schi... 27 1.8
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 25 5.5
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 25 7.3
SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster... 25 7.3
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 25 7.3
SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyce... 25 9.6
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 25 9.6
SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces ... 25 9.6
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 25 9.6
SPAC23C4.16c |atg15||triacylglycerol lipase Atg15 |Schizosacchar... 25 9.6
>SPAC343.20 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 113
Score = 31.1 bits (67), Expect = 0.11
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -2
Query: 242 TSLTRFLSGMALYSAFSCHRSLLLKLVPTIRSLHCITQTKDKNMKIKTG 96
T+ T+F S Y A + H SLL KL+ L+ + K K ++I G
Sbjct: 58 TNFTKF-SKFVYYLAITLHTSLLTKLIYCHADLYALQSIKYKRLRINNG 105
>SPCC4B3.11c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 116
Score = 29.1 bits (62), Expect = 0.45
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 244 FFSDPGQQLIMGIIARDLDHSDAEASITAGGIGFSYANIKLKSPRGSGLN 393
F+S PG++ I I+ L S +GG G Y + +KS G N
Sbjct: 27 FYSTPGERRIKDILTEKLSPSSLRVIDVSGGCGSMY-QVAIKSKAFQGKN 75
>SPCC16C4.03 |pin1||peptidyl-prolyl cis-trans isomerase
Pin1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 175
Score = 27.1 bits (57), Expect = 1.8
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 188 GKKKPNITPSHSRNESKKYFFRIRDNN*LWVL*PAT*TTRMLKQVLLQEASVSLMPT 358
G KP I SR+ ++ YFF + LW PA LK+ + E S+ PT
Sbjct: 5 GLPKPWIVKI-SRSRNRPYFFNTETHESLWEP-PAATDMAALKKFIANELQESVTPT 59
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 145 KDLIVGTSFNKRLLWQEKAEYNAIPLKKRVKEV 243
K+LIV TS ++ L +E+ +NAI KR++E+
Sbjct: 711 KELIVQTSSFQKELVEERERHNAI--SKRLQEI 741
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -1
Query: 174 IKTSTYYKIFTLYNTDQR*KYENQNGSELHFVVVFLKRLPQCVMCHVRR 28
++ TY +F +T R + ++ + VFL+ LPQC + +R+
Sbjct: 64 LEDKTYSPLFKAGHTTWRIVLFPKGCNQTEYASVFLEYLPQCKVEAIRK 112
>SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 117 KYENQNGSELHFVVVFLK 64
K+ N +GS++HF +FLK
Sbjct: 387 KFSNIDGSDIHFRYLFLK 404
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +2
Query: 395 TNLKSTRKKVIL*TIVFNQEVFYHFMF 475
+N+K ++K+++ + F+ EV+ F+F
Sbjct: 266 SNVKCSKKQILFSLLYFSSEVYLSFVF 292
>SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 324
Score = 24.6 bits (51), Expect = 9.6
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +1
Query: 301 HSDAEASITAGGIGFSYANIKLKSPRGSGLNYQLEIYT*KSYTLDHSFQSRSFLSFHV*F 480
H+D +I G I S ++I L++ +G QLE + + + ++ SF SF++
Sbjct: 21 HADKGITIKTGKIAVSSSDIPLRNRKGLLTWDQLEPWQQDNQYIISGYRPPSF-SFYLCV 79
Query: 481 RLLYSIFN 504
+ ++ + N
Sbjct: 80 KSIFHVHN 87
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 260 PGSEKNTSLTRFLSGMALYSAFSCHRSL 177
PG T++ S +SA SCHR+L
Sbjct: 453 PGKTVATTVCHSSSSSGDFSALSCHRNL 480
>SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 571
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 270 QLLSRIRKKYFFDSFLEWDGVIFGF 196
Q S I +FD EWD V+ GF
Sbjct: 499 QKTSSILVDLYFDFKAEWDNVMLGF 523
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 24.6 bits (51), Expect = 9.6
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 190 QEKAEYNAIPLKKRVKEVFFSDPGQQLIMGIIARDLDHSDAEASITAGGIGFSYANIKLK 369
+EKA+ I K+ +E F+ + + + I R + H D ASI ++ ++I+ K
Sbjct: 753 EEKAKEKGINAKQASQE-FYENTCMRAVNQSIGRAIRHRDDYASIILLDSRYNRSSIQRK 811
Query: 370 SP 375
P
Sbjct: 812 LP 813
>SPAC23C4.16c |atg15||triacylglycerol lipase Atg15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 24.6 bits (51), Expect = 9.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 387 SRPSWAFQLYVGIRETDASCSNTCFSIRV 301
+R SWA+ G + +CS TC V
Sbjct: 223 ARVSWAWSTVCGCYKNTYTCSQTCLEDEV 251
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,195,959
Number of Sequences: 5004
Number of extensions: 46211
Number of successful extensions: 111
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -