Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_F23
         (536 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046...    29   1.8  
03_01_0175 - 1413599-1413934,1414326-1414526,1414660-1414962           29   2.3  
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657...    29   3.1  
08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,438...    27   7.2  
07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659           27   9.5  

>12_02_0477 +
           19503678-19503803,19504381-19504422,19504631-19504684,
           19504946-19505068,19505154-19505210,19505299-19505373,
           19505925-19506026
          Length = 192

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = -3

Query: 363 PHNPVLRLHYLNLSRE-FRSLARGGGDLRNRFTLSMVSSLVSEVRNGFGFAVSVRVTVAS 187
           PH        +++S + F SL    G+ ++   L    +L+S++++GFG    + VTV S
Sbjct: 117 PHVNRTEYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMS 176

Query: 186 SHSNNNV 166
           +     +
Sbjct: 177 AMGEEQI 183


>03_01_0175 - 1413599-1413934,1414326-1414526,1414660-1414962
          Length = 279

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +2

Query: 191 ATVTRTLTANPKPLRTSLTRLDTMLRVNLFLRSPPPRAKL 310
           A    TL ++P P   + T   +   V L LRSPPPR  L
Sbjct: 2   AATAVTLPSSPAPFPVTTTASSSR-NVRLLLRSPPPRRAL 40


>07_03_1141 -
           24264534-24264635,24265542-24265616,24265709-24265765,
           24265903-24266025,24266509-24266520,24267014-24267157,
           24267606-24267626
          Length = 177

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -3

Query: 363 PHNPVLRLHYLNLSRE-FRSLARGGGDLRNRFTLSMVSSLVSEVRNGFGFAVSVRVTVAS 187
           PH        +++S + F SL    G+ ++   L    SL+ +++ GFG    + VTV S
Sbjct: 102 PHVNRTEYQLIDISEDGFVSLLTESGNTKDDLRLPTDDSLLGQIKTGFGEGKDLVVTVMS 161

Query: 186 SHSNNNV 166
           +     +
Sbjct: 162 AMGEEQI 168


>08_01_0505 -
           4379722-4380795,4380868-4381008,4381099-4381270,
           4381944-4382047,4382127-4382259,4384477-4384653,
           4385164-4385309,4385536-4385625,4385703-4385915,
           4386090-4386182,4386743-4386937,4387018-4387110,
           4387924-4388019,4388556-4388985,4389424-4390091,
           4392074-4392271,4392690-4393407,4394036-4394181
          Length = 1628

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 22/77 (28%), Positives = 33/77 (42%)
 Frame = -3

Query: 369 ASPHNPVLRLHYLNLSREFRSLARGGGDLRNRFTLSMVSSLVSEVRNGFGFAVSVRVTVA 190
           AS H P  +   +N   + R L  GG + RN+   +   S   +V N  G A   + T  
Sbjct: 548 ASKHCPDAKYMNVNSDNQIRQLFFGGIENRNKRGETWPQSKTFKVPNDEGIATEGKKTPK 607

Query: 189 SSHSNNNVRLVVVVESL 139
           S      ++L  +VE L
Sbjct: 608 S----RTIKLFTIVEDL 620


>07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659
          Length = 175

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -3

Query: 315 FRSLARGGGDLRNRFTLSMVSSLVSEVRNGFGFAVSVRVTVASS 184
           F SL    G+ ++   L    +L+ +++ GFG    V VTV S+
Sbjct: 63  FVSLLTESGNTKDDLGLPTYDNLLGQIKTGFGEGKDVVVTVMSA 106


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,199,121
Number of Sequences: 37544
Number of extensions: 225673
Number of successful extensions: 578
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)